Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20brenneri_20[genbank_20GCA_5F000143925.2_202010-11- 15] 3,305 sequences; 190,369,721 total letters Query= AAMG01001851.1 Length=140 Score E Sequences producing significant alignments: (Bits) Value seq1827 116 3e-24 >seq1827 Length=14047 Score = 116 bits (128), Expect = 3e-24 Identities = 108/137 (79%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 || |||||||||||||||||||||||||||||| | |||||||||||||| | || Sbjct 9569 TAGCTTTTATCCGTTGAGCGATGGCCCTTCCATGCGGTACCACCGGATCACTAAGCCCGA 9628 Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACTAT 120 |||||| |||||| | |||| | ||||||| |||||| | ||| |||| ||||||| | Sbjct 9629 CTTTCGTCCCTGCTCGACTTGTAGGTCTCGCAGTCAAGCTCCCTTATGCCTTTGCACTCT 9688 Query 121 CACTACGATTTCCGACC 137 | ||||||| ||| Sbjct 9689 TCGAATGATTTCCAACC 9705 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 351989093500