Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20brenneri_20[genbank_20GCA_5F000143925.2_202010-11- 15] 3,305 sequences; 190,369,721 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq369 86.0 6e-15 >seq369 Length=46607 Score = 86.0 bits (94), Expect = 6e-15 Identities = 89/113 (79%), Gaps = 3/113 (3%) Strand=Plus/Plus Query 5 CCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATACATT 64 |||| | ||||| ||||| |||| |||| | ||||| ||||| |||||| | ||| | Sbjct 38461 CCAGCAGGTTTACCTTGAATAAATCAGAGTGCTCAAAACAGGCTTTTGCTTGTATAGCTC 38520 Query 65 ACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGAC 117 | ||||||||||| |||||||| | ||||||| |||||| || |||||| || Sbjct 38521 ATCATGGAATAATGAAATAGGAC-TTCGGTTCT-TTTTGTTGG-TTCTAGAAC 38570 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511983607200