Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20brenneri_20[genbank_20GCA_5F000143925.2_202010-11- 15] 3,305 sequences; 190,369,721 total letters Query= AAMG01002223.1 Length=366 Score E Sequences producing significant alignments: (Bits) Value seq1827 158 3e-36 >seq1827 Length=14047 Score = 158 bits (174), Expect = 3e-36 Identities = 172/227 (76%), Gaps = 1/227 (0%) Strand=Plus/Plus Query 69 TTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGCTACTTGGC 128 || |||||| || ||| ||||| ||||| | |||||||||| |||||| | | || Sbjct 13471 TTCTTCCCTGGCAACAGAGCTTTACGATCCGAA-AACCTTCATCACTCACGCGGCATTGC 13529 Query 129 TGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGG 188 | |||| || ||| |||||| || ||||| ||||||||||||||||||||| ||| Sbjct 13530 TCCGTCAGGCTTTCGCCCATTGCGGAAGATTCCCTACTGCTGCCTCCCGTAGGAGTCTGG 13589 Query 189 ACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCATCGTAGGCT 248 |||||||||||| ||| ||||| || | |||||||| | ||| |||||| | || Sbjct 13590 GCCGTGTCTCAGTCCCAGTGTGGCCGATCACCCTCTCAGGTCGGCTACGCATCGTCGCCT 13649 Query 249 AGGTGGGCCGTTACCCCGCCTACTACCTAATGGAACGCATCCCCATC 295 |||| ||||||||||| || |||| |||||| |||| |||||| Sbjct 13650 TGGTGAGCCGTTACCCCACCAACTAGCTAATGCGCCGCAGGCCCATC 13696 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1068764676160