Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20brenneri_20[genbank_20GCA_5F000143925.2_202010-11- 15] 3,305 sequences; 190,369,721 total letters Query= NC_032108.1 Length=589068 Score E Sequences producing significant alignments: (Bits) Value seq10 86.0 2e-11 >seq10 Length=1639106 Score = 86.0 bits (94), Expect = 2e-11 Identities = 107/147 (73%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 364423 ACCAATAGTCATACGAGAGGGAATGGAGAGAGGGTTGATGATGATGTCAGGCACCATGCC 364482 |||||| ||||||||||| |||| || | |||| || |||||||| || || | || Sbjct 1107943 ACCAATTGTCATACGAGATGGAACGGCGTGAGGATTAATGATGATATCTGGAGTGAGTCC 1107884 Query 364483 GTCAGCGGTAAAGGGCATATCTTCGGGAGGAACGATGAGACCAATGGTTCCCTTTTGCGC 364542 ||||| || || ||||| ||||| | || |||| ||| || || || || || | Sbjct 1107883 TTCAGCAGTGAACGGCATGTCTTCCTGTCGATACATGATACCCATCGTACCTTTCTGACC 1107824 Query 364543 ATAGCGAGAAGCAAACTTGTCGCCAAT 364569 | |||||||||||||| || ||||| Sbjct 1107823 GTGACGAGAAGCAAACTTATCACCAAT 1107797 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1884806583896365