Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20briggsae_20[genbank_20GCA_5F000004555.3_202014-07- 02] 367 sequences; 108,384,165 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq9 120 5e-25 >seq9 Length=17485439 Score = 120 bits (132), Expect = 5e-25 Identities = 91/110 (83%), Gaps = 12/110 (11%) Strand=Plus/Minus Query 149 GCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGA 208 ||||| || |||||| ||||||||||||| ||||||||||||||||||||||||||||| Sbjct 14267903 GCAGGCTAGAGTCTCGCTCGTTATCGGAATAAACCAGACAAATCACTCCACCAACTAAGA 14267844 Query 209 ACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 ||||||||||||||| | |||||||||| |||||||||| Sbjct 14267843 ACGGCCATGCACCAC------------CGAGAAAGAGCTTTCAATCTGTC 14267806 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796797167127