Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20elegans_20[refseq_20GCF_5F000002985.6_202013-02-07] 7 sequences; 100,286,401 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq1 215 8e-54 >seq1 Length=15072434 Score = 215 bits (238), Expect = 8e-54 Identities = 207/260 (80%), Gaps = 9/260 (3%) Strand=Plus/Minus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 || || || |||| ||||||||| ||||||| |||| | |||||||||||||||||||| Sbjct 15063527 ACCCGCTGACTCCACCAGTGTAGCACGCGTGCAGCCCCGGACATCTAAGGGCATCACAGA 15063468 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 |||||||| | ||||| | || |||| | || | ||||||||||||| | Sbjct 15063467 CCTGTTATCG-CTCAATC-TCGTGCGGCTAAACACCGCTTATCCCTCTAAGAAGTTA--T 15063412 Query 122 ACCAACC---ATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAAT 178 || |||| | | ||| |||||||||||| || |||||| ||||||||||||| Sbjct 15063411 ACGAACCCGAAGATTCG--CCAACTATTTAGCAGGCTAGAGTCTCGCTCGTTATCGGAAT 15063354 Query 179 TAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAA 238 |||||||||||||||||||||||||||||||||||||||||||||| ||| |||| | Sbjct 15063353 AAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCAACCACCAAATCGA 15063294 Query 239 GAAAGAGCTATCAATCTGTC 258 ||||||||| |||||||||| Sbjct 15063293 GAAAGAGCTTTCAATCTGTC 15063274 Score = 215 bits (238), Expect = 8e-54 Identities = 207/260 (80%), Gaps = 9/260 (3%) Strand=Plus/Minus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 || || || |||| ||||||||| ||||||| |||| | |||||||||||||||||||| Sbjct 15070724 ACCCGCTGACTCCACCAGTGTAGCACGCGTGCAGCCCCGGACATCTAAGGGCATCACAGA 15070665 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 |||||||| | ||||| | || |||| | || | ||||||||||||| | Sbjct 15070664 CCTGTTATCG-CTCAATC-TCGTGCGGCTAAACACCGCTTATCCCTCTAAGAAGTTA--T 15070609 Query 122 ACCAACC---ATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAAT 178 || |||| | | ||| |||||||||||| || |||||| ||||||||||||| Sbjct 15070608 ACGAACCCGAAGATTCG--CCAACTATTTAGCAGGCTAGAGTCTCGCTCGTTATCGGAAT 15070551 Query 179 TAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAA 238 |||||||||||||||||||||||||||||||||||||||||||||| ||| |||| | Sbjct 15070550 AAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCAACCACCAAATCGA 15070491 Query 239 GAAAGAGCTATCAATCTGTC 258 ||||||||| |||||||||| Sbjct 15070490 GAAAGAGCTTTCAATCTGTC 15070471 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796799945967