Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20japonica_20[genbank_20GCA_5F000147155.1_202010-09- 24] 18,817 sequences; 166,256,191 total letters Query= AAMG01001851.1 Length=140 Score E Sequences producing significant alignments: (Bits) Value seq8043 116 3e-24 >seq8043 Length=1654 Score = 116 bits (128), Expect = 3e-24 Identities = 108/137 (79%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 || |||||||||||||||||||||||||||||| | |||||||||||||| | || Sbjct 1209 TAGCTTTTATCCGTTGAGCGATGGCCCTTCCATGCGGTACCACCGGATCACTAAGCCCGA 1268 Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACTAT 120 |||||| |||||| | |||| | ||||||| |||||| | ||| |||| ||||||| | Sbjct 1269 CTTTCGTCCCTGCTCGACTTGTAGGTCTCGCAGTCAAGCTCCCTTATGCCTTTGCACTCT 1328 Query 121 CACTACGATTTCCGACC 137 | ||||||| ||| Sbjct 1329 TCGAATGATTTCCAACC 1345 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 351937903900