Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20nigoni_20[genbank_20GCA_5F001643685.1_202016-05-13] 3,249 sequences; 137,395,604 total letters Query= AAMG01001545.1 Length=359 Score E Sequences producing significant alignments: (Bits) Value seq626 122 2e-25 >seq626 Length=3710 Score = 122 bits (134), Expect = 2e-25 Identities = 156/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 1 CGAAGTTCGGCACCTGGCGCAGCGCCGGCAGGATGTTCACGTTCGGCGAAGCCTTGGAAT 60 ||||||| ||| || ||||| ||||||||||| | | |||||| ||||| || | Sbjct 1206 CGAAGTTGGGCTTCTTCAGCAGCACCGGCAGGATGGTGGTCTGCGGCGAGGCCTTCGAGT 1147 Query 61 ACATGTAGCACACGTAACCGCTGCAAAAACCGCAGAAGTTGCACGGGCCCATCTGCGCGC 120 |||||||||| |||| ||| ||||||||||| || || ||||| | || ||| Sbjct 1146 ACATGTAGCAGCCGTAGTTCTCGCAGAAACCGCAGAAATTACAGGGGCCGAGACGCACGC 1087 Query 121 CATAGGGGTTGGTGTACGGCCCCGAGGTATTGGCCGACGGCAGGTTGTAGGGTTTGTAAC 180 |||| |||||||||||||| ||||| | |||||||| ||| || || | | ||| Sbjct 1086 CATAAGGGTTGGTGTACGGACCCGAAGCATTGGCCGCAGGCGCCGGATACGGATGGAAAC 1027 Query 181 CGACCTCGGCAGCGGCTTTCTGAAACAGCTGTGCG 215 |||||||| || || || | |||| ||| ||| Sbjct 1026 CGACCTCGCGCGCCGCCTTGTCGAACAACTGGGCG 992 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046366002464