Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20nigoni_20[genbank_20GCA_5F001643685.1_202016-05-13] 3,249 sequences; 137,395,604 total letters Query= AAMG01002055.1 Length=294 Score E Sequences producing significant alignments: (Bits) Value seq60 84.2 4e-14 >seq60 Length=2350 Score = 84.2 bits (92), Expect = 4e-14 Identities = 141/203 (69%), Gaps = 1/203 (0%) Strand=Plus/Plus Query 82 CCAACCTGAGCACCGCAAGGAAGGCTTCTTAGTGGAATTTCCACGTTGCCCACTCGCTTC 141 ||| | |||| || || |||||| |||| | || |||||||| ||||| | | | Sbjct 12 CCATCTTGAGTGCCTGAATGAAGGCCTCTT-GCGGGATTTCCACCTTGCCGAACTGACGC 70 Query 142 ATGCGTTTTTTACCGGCCTTTTGCTTCTCAAGCAGCTTGCGCTTACGGCTTACGTCACCG 201 ||||| || || || |||| ||||| || || || ||||||||||| | || ||| Sbjct 71 ATGCGCTTCTTGCCTTCCTTCTGCTTGTCCAGAAGTTTGCGCTTACGCGAAATATCGCCG 130 Query 202 CCGTAGCATTTGGCCAGTACGTTCTTTCTGAGAGCCTTGACGGAGGTCCGCGCAATGATC 261 |||||||| |||||| |||| ||| | || || | || ||||| | ||| Sbjct 131 CCGTAGCACTTGGCCGTCACGTCCTTGCGCAGCGCTGAAATGGTTTCGCGCGCCACGATA 190 Query 262 TGCCCGCCAATGGCGGCCTGGAT 284 | ||||||||||| ||||| || Sbjct 191 CGGCCGCCAATGGCTGCCTGAAT 213 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 838372760384