Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20remanei_20[refseq_20GCF_5F000149515.1_202007-07-19] 3,670 sequences; 145,442,736 total letters Query= AAMG01000345.1 Length=193 Score E Sequences producing significant alignments: (Bits) Value seq1792 136 4e-30 >seq1792 Length=5876 Score = 136 bits (150), Expect = 4e-30 Identities = 148/193 (77%), Gaps = 4/193 (2%) Strand=Plus/Plus Query 2 TACCTGAAGCTTAGAAGCTTTTCTTGGAAGCATGGCATCAACCACTTCGTCATCTAAAAG 61 || |||||||||||| |||||| |||||| || | |||| |||||||| | |||| Sbjct 3935 TAACTGAAGCTTAGAGACTTTTCCTGGAAGTATAGTATCAGCCACTTCGCTAG-TAAAC- 3992 Query 62 ATAACTCGTCATCAGCTCCCGGCCTT-AGAATCCCGGATTTACCTAAGATTCCAGCCTAC 120 || || | |||||||| | || | || | ||||||||| |||||||| | |||||| Sbjct 3993 -TAGCTTGCTATCAGCTCTCAGCATAGAGCACCCCGGATTTGCCTAAGATGCATGCCTAC 4051 Query 121 CACCTTAAACTTGGACAACCAACGCCAAGCTGGCCTAGCCTTCTCCGTCCCTCCATCGCA 180 |||| || |||||||||||||||| |||| | || | |||||||||| ||||||| Sbjct 4052 TGCCTTTCACCTGGACAACCAACGCCAGGCTGACTTAACTTTCTCCGTCCTCTCATCGCA 4111 Query 181 TTAACCAGAAGTA 193 ||| |||||||| Sbjct 4112 TTACACAGAAGTA 4124 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 518381569260