Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20remanei_20[refseq_20GCF_5F000149515.1_202007-07-19] 3,670 sequences; 145,442,736 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq1164 77.0 3e-12 >seq1164 Length=3755 Score = 77.0 bits (84), Expect = 3e-12 Identities = 87/113 (77%), Gaps = 3/113 (3%) Strand=Plus/Plus Query 5 CCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATACATT 64 |||| | ||||| ||||| |||| |||| | |||| || || |||||| ||||| | Sbjct 3111 CCAGCAGGTTTACCTTGAATAAATCAGAGTGCTCAATACAAGCGTTTGCTTGAATAGCTC 3170 Query 65 ACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGAC 117 | ||||||||||| || ||||| | ||||||| |||||| || |||||| || Sbjct 3171 ATCATGGAATAATGAAACAGGAC-TTCGGTTCT-TTTTGTTGG-TTCTAGAAC 3220 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511981796800