Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20remanei_20[refseq_20GCF_5F000149515.1_202007-07-19] 3,670 sequences; 145,442,736 total letters Query= NC_032108.1 Length=589068 Score E Sequences producing significant alignments: (Bits) Value seq3642 86.0 2e-11 >seq3642 Length=748538 Score = 86.0 bits (94), Expect = 2e-11 Identities = 107/147 (73%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 364423 ACCAATAGTCATACGAGAGGGAATGGAGAGAGGGTTGATGATGATGTCAGGCACCATGCC 364482 |||||| ||||||||||| |||| | ||||||| |||||||| ||||| | || Sbjct 123578 ACCAATTGTCATACGAGACGGAACCGCATGAGGGTTAATGATGATATCAGGAGTAAGTCC 123637 Query 364483 GTCAGCGGTAAAGGGCATATCTTCGGGAGGAACGATGAGACCAATGGTTCCCTTTTGCGC 364542 ||||| || || ||||||||||| | || |||| ||| || || || || || | Sbjct 123638 TTCAGCAGTGAAAGGCATATCTTCTTGCCGATACATGATACCCATTGTACCTTTCTGACC 123697 Query 364543 ATAGCGAGAAGCAAACTTGTCGCCAAT 364569 | ||||| ||||| ||||| ||||| Sbjct 123698 GTGACGAGATGCAAATTTGTCTCCAAT 123724 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1884797769107310