Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20sinica_20[WormBase_20PRJNA194557-WS256_202016-12- 10] 15,261 sequences; 131,797,386 total letters Query= AAMG01000750.1 Length=102 Score E Sequences producing significant alignments: (Bits) Value seq4324 104 1e-20 seq10117 73.4 2e-11 >seq4324 Length=7871 Score = 104 bits (114), Expect = 1e-20 Identities = 63/67 (94%), Gaps = 0/67 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 |||||||||||||| ||||||||||| |||||||||||||||| ||||||||||||||| Sbjct 2087 GGAAAAGAAACTAAACAGGATTCCCTTAGTAACGGCGAGTGAAACGGGAAGAGCCCAGCG 2146 Query 61 CCGAATC 67 ||||||| Sbjct 2147 CCGAATC 2153 >seq10117 Length=1032 Score = 73.4 bits (80), Expect = 2e-11 Identities = 57/68 (84%), Gaps = 0/68 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||| ||||||||||| ||||||||| |||||||||||||||| ||||| || ||| | Sbjct 935 GGAGAAGAAACTAACGAGGATTCCCGAAGTAACGGCGAGTGAATGGGGAAAAGTCCAATG 876 Query 61 CCGAATCC 68 | |||||| Sbjct 875 CTGAATCC 868 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 230367036240