Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20sinica_20[WormBase_20PRJNA194557-WS256_202016-12- 10] 15,261 sequences; 131,797,386 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq13164 95.1 1e-17 >seq13164 Length=340 Score = 95.1 bits (104), Expect = 1e-17 Identities = 129/175 (74%), Gaps = 4/175 (2%) Strand=Plus/Plus Query 12 TTTTACTTTGAAAAAATTAGAGCG-TTCAAAGCAGGCCTTTGCTCGAATACATTACCATG 70 |||||||||||||||||||||| | |||||| ||||| ||| | |||| | |||| Sbjct 128 TTTTACTTTGAAAAAATTAGAGTGCTTCAAA-CAGGCTAGTGCCTGCATACTCTTGCATG 186 Query 71 GAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGAT 130 |||||||||||||||| | ||||||||||||| ||||| | || | ||||| | Sbjct 187 GAATAATAGAATAGGATCT-TGGTTCTATTTTGTTGGTTT-TCTGAACTGAGATAATGGT 244 Query 131 AAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGA 185 || | ||| | |||||| | |||| || | |||||||||||||||| Sbjct 245 TAAGAGGGACGGACGGGGGCATTCGTATCGCTGCGTGAGAGGTGAAATTCTTGGA 299 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511924305440