Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20tropicalis_20[genbank_20GCA_5F000186765.1_202011- 01-31] 665 sequences; 79,321,433 total letters Query= AAMG01000383.1 Length=435 Score E Sequences producing significant alignments: (Bits) Value seq550 215 1e-53 >seq550 Length=109190 Score = 215 bits (238), Expect = 1e-53 Identities = 256/341 (75%), Gaps = 11/341 (3%) Strand=Plus/Minus Query 76 AATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAA-GACAGGTGTGAAATCCCCGGG 134 ||||| ||||||||||| | || |||||| | ||| | | | ||||||| ||| || Sbjct 8061 AATTATTGGGCGTAAAGAGCTCGTAGGCGGCT-TGTCGCGTCTGCTGTGAAAACCCGAGG 8003 Query 135 CTTAACCTGGGAATTGCATTTGTGACTG-CACGACTAGAGTGTGTCAGAGGGGGGTGGAA 193 || ||||| || |||| | | || | || | |||||||| | || || | ||||| Sbjct 8002 CTCAACCTCGGGCCTGCAGTGGGTACGGGCAAG-CTAGAGTGCGGTAGGGGAGATTGGAA 7944 Query 194 TTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGCGAAGGCAGCC 253 |||| ||||||| ||| |||||| |||||| ||||||||||| ||||||||||||| Sbjct 7943 TTCCTGGTGTAGCGGTGGAATGCGCAGATATCAGGAGGAACACCGATGGCGAAGGCAGAT 7884 Query 254 CCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAGATACC 313 | ||||| ||||||||| | | ||||||| |||||||| |||||||||||||||| Sbjct 7883 CTCTGGGCCGTAACTGACGCTGAGGAGCGAAAGCATGGGGAGCGAACAGGATTAGATACC 7824 Query 314 CTGGTAGTCCACGCCCTAAACGATATCAACTAGTTGTTGGGGATTTAC-----TTCCTTG 368 ||||||||||| ||| |||||| | |||||| ||| ||| | | | || || Sbjct 7823 CTGGTAGTCCATGCCGTAAACGTTGGGAACTAGATGTAGGGACTGTTCCACGGTTTCT-- 7766 Query 369 GTAACGTAGCTAACGCGTGAAGTTGACCGCCTGGGGAATAC 409 || |||||||||||| | ||||| ||||||||||| ||| Sbjct 7765 GTGTCGTAGCTAACGCATTAAGTTCCCCGCCTGGGGAGTAC 7725 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1289591424160