Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20tropicalis_20[genbank_20GCA_5F000186765.1_202011- 01-31] 665 sequences; 79,321,433 total letters Query= AAMG01000750.1 Length=102 Score E Sequences producing significant alignments: (Bits) Value seq230 98.7 5e-19 seq214 95.1 6e-18 seq201 95.1 6e-18 seq626 91.5 7e-17 >seq230 Length=1024 Score = 98.7 bits (108), Expect = 5e-19 Identities = 62/67 (93%), Gaps = 0/67 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 |||||||||||||| |||||||||| |||||||||||||||| ||||||||||||||| Sbjct 719 GGAAAAGAAACTAAAAAGGATTCCCTTAGTAACGGCGAGTGAAACGGGAAGAGCCCAGCG 660 Query 61 CCGAATC 67 ||||||| Sbjct 659 CCGAATC 653 >seq214 Length=1368 Score = 95.1 bits (104), Expect = 6e-18 Identities = 61/67 (91%), Gaps = 0/67 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 |||||||||||||| ||| |||||| |||||||||||||||| ||||||||||||||| Sbjct 1118 GGAAAAGAAACTAAAAAGGGTTCCCTTAGTAACGGCGAGTGAAACGGGAAGAGCCCAGCG 1059 Query 61 CCGAATC 67 ||||||| Sbjct 1058 CCGAATC 1052 >seq201 Length=1067 Score = 95.1 bits (104), Expect = 6e-18 Identities = 61/67 (91%), Gaps = 0/67 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 |||||||||||||| |||||||||| ||| |||||||||||| ||||||||||||||| Sbjct 692 GGAAAAGAAACTAAAAAGGATTCCCTTAGTGACGGCGAGTGAAACGGGAAGAGCCCAGCG 633 Query 61 CCGAATC 67 ||||||| Sbjct 632 CCGAATC 626 >seq626 Length=20921866 Score = 91.5 bits (100), Expect = 7e-17 Identities = 61/67 (91%), Gaps = 1/67 (1%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||||||||| |||| |||||||||| |||||||||||||||| ||||||||||||||| Sbjct 1685368 GGAAAAGAA-CTAAAAAGGATTCCCTTAGTAACGGCGAGTGAAACGGGAAGAGCCCAGCG 1685310 Query 61 CCGAATC 67 ||||||| Sbjct 1685309 CCGAATC 1685303 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 230398563600