Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20tropicalis_20[genbank_20GCA_5F000186765.1_202011- 01-31] 665 sequences; 79,321,433 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value seq199 311 2e-82 >seq199 Length=2081 Score = 311 bits (344), Expect = 2e-82 Identities = 295/381 (77%), Gaps = 28/381 (7%) Strand=Plus/Plus Query 2 ACCCGGCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAA 61 |||| |||||||||| |||| | ||||||||| |||||| | ||||||| | || Sbjct 292 ACCCCGCATCTTCACGGGGAATTCAATTTCACTGAGTCTGCGTTGGAGACAGCGGGGAAG 351 Query 62 TCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAC 121 |||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 352 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAT 411 Query 122 CGTTATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTG--CTCTAA 179 ||||||||||| ||||||||||||||||||||| |||| ||||||| | ||||| Sbjct 412 GGTTATAGTTACCACCGCCGTTTACTGGGGCTTAAATTCAAAGCTTCGACCGAAGTCTAA 471 Query 180 CAGATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGAC 239 | ||| |||||||||||||||||||||||||||||| | ||||| || |||||| Sbjct 472 CCTCTCCTCTTAACCTTCCAGCACCGGGCAGGCGTCAGTCCGTATACGTCCACTTGCGTG 531 Query 240 TTAGCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCC----- 294 |||||| |||||||||||| |||||||||||||| || ||||||||||| Sbjct 532 TTAGCACGGACCTGTGTTTTTAGTAAACAGTCGCTTCCCACTGGTCTCTGCGGCCACCAC 591 Query 295 ------------------TGTCATA---GACAGGCACCCCTTCTCCCTAAGTTACGGGGT 333 || ||| | ||| ||||||||||| ||||||||||| Sbjct 592 ACCCTTTCCCAAGCAAGTTGGTATAAGCGGATGGCCCCCCTTCTCCCGAAGTTACGGGGG 651 Query 334 CATTTTGCCGAGTTCCTTAAC 354 |||||||||||||||||| || Sbjct 652 CATTTTGCCGAGTTCCTTCAC 672 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1062392935040