Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20tropicalis_20[genbank_20GCA_5F000186765.1_202011- 01-31] 665 sequences; 79,321,433 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq550 495 1e-137 >seq550 Length=109190 Score = 495 bits (548), Expect = 1e-137 Identities = 413/500 (83%), Gaps = 8/500 (2%) Strand=Plus/Minus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 |||| |||||||| | |||||||||||||||||||||| ||||||||||||| ||||||| Sbjct 7727 TACGGCCGCAAGGCTAAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGCGGAGCAT 7668 Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCT-GACCCCT 119 | || ||||||||| |||||||||||||||||||||| |||||||| | || | || Sbjct 7667 GCGGATTAATTCGATGCAACGCGAAGAACCTTACCAAGGCTTGACATAGCCGAGAACGCT 7608 Query 120 CTAGAGATAGAGGTTTCCCCTTCGGGGGACAGAGTGACAGGTGATGCATGGTTGTCGTCA 179 |||||||| || || || || || || ||||||| |||||||||||||||| Sbjct 7607 GTAGAGATACAGAACTCT--TT--GGACACTCGGTTACAGGTGGTGCATGGTTGTCGTCA 7552 Query 180 GCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTTG 239 ||||||||||||||||||| |||||||||| ||||||||||||||||| || |||| Sbjct 7551 GCTCGTGTCGTGAGATGTTCGGTTAAGTCCGGCAACGAGCGCAACCCTCGTCCTATGTTG 7492 Query 240 CCATCA--TTAAGTTGGGCACTCTAAGTTGACTGCCGGTGACAAACCGGAGGAAGGTGGG 297 ||| || ||| | |||| |||| | ||||||| | ||| |||||||||||||| Sbjct 7491 CCAGCACGTTATGGTGGGAACTCATGGGATACTGCCGTGGTCAACACGGAGGAAGGTGGG 7432 Query 298 GACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAA 357 || |||||||||||||||||||||||||| ||||||| ||| | ||||||||||| | | Sbjct 7431 GATGACGTCAAATCATCATGCCCCTTATGTCTTGGGCTTCACGCATGCTACAATGGCCGA 7372 Query 358 TACAAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCGGA 417 |||||||||| |||| |||||||||| ||| ||||||| ||||| | |||||||||||| Sbjct 7371 TACAAAGGGCTGCGATACCGCGAGGTGGAGCGAATCCCAAAAAGTCGGTCTCAGTTCGGA 7312 Query 418 TTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAGC-ATG 476 ||| |||||||||||||| |||||| ||| ||||||||||||| |||||||| | | Sbjct 7311 TTGGGGTCTGCAACTCGACCCCATGAAGTCGGAGTCGCTAGTAATCGCAGATCAGCAACG 7252 Query 477 CTACGGTGAATACGTTCCCG 496 || ||||||||||||||||| Sbjct 7251 CTGCGGTGAATACGTTCCCG 7232 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503989998400