Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20tropicalis_20[genbank_20GCA_5F000186765.1_202011- 01-31] 665 sequences; 79,321,433 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq663 159 1e-36 >seq663 Length=1148 Score = 159 bits (176), Expect = 1e-36 Identities = 121/142 (85%), Gaps = 2/142 (1%) Strand=Plus/Plus Query 75 TGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTC 134 ||| ||| || |||||||||||||||||||||| ||||||||||||||| |||||||||| Sbjct 215 TGGATAAGTTTCGCGCCTGCTGCCTTCCTTGGACGTGGTAGCCGTTTCTAAGGCTCCCTC 274 Query 135 TCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGGCCACTATCCTAC 194 |||||| ||||||||| |||| ||||||||||| |||||||||| ||| | |||| Sbjct 275 TCCGGAGTCGAACCCTTATTCTCCGTTACCCGTAACAACCATGGTAGTCCAATGAACTAC 334 Query 195 CATCGAAAGTTGATAGGGCAGA 216 |||| |||||| |||||||| Sbjct 335 CATC--TAGTTGAAAGGGCAGA 354 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510389955840