Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20tropicalis_20[genbank_20GCA_5F000186765.1_202011- 01-31] 665 sequences; 79,321,433 total letters Query= NC_031076.1 Length=38071 Score E Sequences producing significant alignments: (Bits) Value seq243 82.4 2e-11 >seq243 Length=1117 Score = 82.4 bits (90), Expect = 2e-11 Identities = 134/191 (70%), Gaps = 4/191 (2%) Strand=Plus/Minus Query 34984 CGAATGGAAGGACGGCGAGGCCCTGTTCCTGCCCTGCTCGGTGT--GGCGTCAGCCGGCC 35041 ||| ||| |||||||||||| |||||||| |||| | | |||| || || Sbjct 439 CGACTGGTCGGACGGCGAGGCGCTGTTCCTCGGCTGCCGCGCCTTCGGCG--AGTACGCG 382 Query 35042 GAGAACGTGGCCGAATCGCTGGCCAAGGGCATGCGTGTGATCGTCCAGGGACGTCTCCGG 35101 || ||| | |||| ||||| ||||||||| ||| |||||||||||||| |||||| Sbjct 381 GACAACATCGCCGCGTCGCTCACCAAGGGCACGCGAGTGATCGTCCAGGGCCGTCTCACC 322 Query 35102 GCGCGCAGCTACGACGACCGCGACGGAAACCGTCGCACTGTGATCGGGATCGAAGTCGAT 35161 |||||||||| |||| | | || | | ||||| | ||| |||| ||||| Sbjct 321 CAGCGCAGCTACACCGACAACCAGGGGCAGCAGCGCACCTCGCTCGACCTCGAGGTCGAA 262 Query 35162 GACGTGGGCCC 35172 || || ||||| Sbjct 261 GAGGTCGGCCC 251 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 121704638906090