Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20tropicalis_20[genbank_20GCA_5F000186765.1_202011- 01-31] 665 sequences; 79,321,433 total letters Query= NC_032108.1 Length=589068 Score E Sequences producing significant alignments: (Bits) Value seq625 87.8 7e-12 >seq625 Length=33334924 Score = 87.8 bits (96), Expect = 7e-12 Identities = 109/147 (74%), Gaps = 2/147 (1%) Strand=Plus/Minus Query 364424 CCAATAGTCATACGAGAGGGAATGGAGAGAGGGTTGATGATGATGTCAGGCACCATGCCG 364483 ||||| ||||| ||||| |||| || | |||| || || ||||| ||||| || || Sbjct 24785777 CCAATGGTCATCCGAGAAGGAACGGCGTGAGGATTAATAATGATATCAGGAGTCAGTCCT 24785718 Query 364484 TCAGCGGTAAAGGGCATATCTTC-GGGAGGAACGATGAGACCAATGGTTCCCTTTTGCGC 364542 ||||| || || ||||||||||| | || || |||| ||| || || || || || | Sbjct 24785717 TCAGCAGTGAATGGCATATCTTCTTGTCGGTAC-ATGATACCCATTGTACCTTTCTGACC 24785659 Query 364543 ATAGCGAGAAGCAAACTTGTCGCCAAT 364569 || ||||| || |||||||| ||||| Sbjct 24785658 ATGCCGAGACGCGAACTTGTCACCAAT 24785632 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1884870340178845