Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cylicostephanus_20goldi_20[genbank_20GCA_5F000951155.1_202014-10-12] 154,509 sequences; 173,362,437 total letters Query= AAMG01000140.1 Length=336 Score E Sequences producing significant alignments: (Bits) Value seq7671 183 6e-44 >seq7671 Length=2526 Score = 183 bits (202), Expect = 6e-44 Identities = 250/339 (74%), Gaps = 14/339 (4%) Strand=Plus/Minus Query 1 TAGCCCGAGCAGGGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCC 60 || |||| | ||||| ||||||||| |||||| ||||| |||||||||| ||||||||| Sbjct 1445 TACCCCGTG-AGGGGAGTGAAATAGTACCTGAAACCGCGTGCCTACAAGCAGTCGGAGCC 1387 Query 61 GAGTGATTCGG--TGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCAC-C 117 | | ||| ||||||||||||||||| | |||||||| ||||||| || | | Sbjct 1386 TCGCTTTGCGGGGTGACGGCGTGCCTTTTGTAGAATGAGCCAGCGAGTTA--CGATATGC 1329 Query 118 AGCGAGGTTAAGGGCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGAC 177 ||||||||||| ||| | | ||||| || || |||||| ||||| |||||| Sbjct 1328 GGCGAGGTTAAG--CTTAAAAGCG---AGCCGCAGCGAGAGCGAGTCTTAAGAGGGCGTT 1274 Query 178 -GAGTTGG-TGGCGCTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGC 235 |||| | || || ||||||||||||| |||| ||| ||| | ||||| ||||| | Sbjct 1273 TGAGTCGTATGTCG-TAGACGCGAAACCAGGTGAGCTATCCATGGGCAGGCTGAAGCGGG 1215 Query 236 GGTAACGCGTGATGGAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGG 295 ||||| | | |||||| ||||||| | ||||||| | ||||||| | || Sbjct 1214 GGTAAGACTTCGTGGAGGGCCGAACCCACTTAGGTTGAAATCTGAGGGGATGACCTGTGG 1155 Query 296 GTAGGGGTGAAAGGCCAATCAAACTGGGAAATAGCTCGT 334 |||| ||||||||| |||||||| ||| ||| ||||| Sbjct 1154 ATAGGAGTGAAAGGCTAATCAAACCTGGAGATATCTCGT 1116 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 971296936448