Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cylicostephanus_20goldi_20[genbank_20GCA_5F000951155.1_202014-10-12] 154,509 sequences; 173,362,437 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq10916 297 3e-78 >seq10916 Length=2236 Score = 297 bits (328), Expect = 3e-78 Identities = 214/241 (89%), Gaps = 6/241 (2%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| |||||||||| |||||||||| ||||||||||||||| | Sbjct 363 GTACAAAGGGCAGGGACGTAATCAACGCGAG-TTGATGACTCACGCTTACTAGGAATT-C 306 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAA-GATT 119 |||||| ||| |||| |||||||| | ||||||||| ||||||||| ||||||| |||| Sbjct 305 CTCGTTAAAGTCCAAAAATTGCAAGGGACTATCCCCAGCACGATGAAGTTTCAAAAGATT 246 Query 120 ACCCGGACCTGTCGGCCAAGGTGAT-AGACTCGTTGAATACATCAGTGTAGCGCGCGTGC 178 |||||||||| || ||||| || | ||||||||| | |||||||||||||||||||| Sbjct 245 ACCCGGACCTTCCGATCAAGG--ATGAAACTCGTTGACTTCATCAGTGTAGCGCGCGTGC 188 Query 179 GGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAA 238 |||||||||||||||||||||||||||||||||||||||||||||||||| | | |||| Sbjct 187 GGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCATAGATTAAA 128 Query 239 A 239 | Sbjct 127 A 127 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 750874401935