Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cylicostephanus_20goldi_20[genbank_20GCA_5F000951155.1_202014-10-12] 154,509 sequences; 173,362,437 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq10916 316 8e-84 >seq10916 Length=2236 Score = 316 bits (350), Expect = 8e-84 Identities = 254/305 (83%), Gaps = 5/305 (2%) Strand=Plus/Plus Query 379 TAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAA 438 ||||||| || | ||||||| ||| || ||||||||| ||||||||||||||||||||| Sbjct 1913 TAGGATGTTGACAAAATGGTTTTAAACGACCCGTCTTGAAACACGGACCAAGGAGTCTAA 1972 Query 439 CATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGG 498 || ||||||||| |||| ||| |||| | | ||||||||||||||| |||||| Sbjct 1973 CAAATATGCGAGTATTTGAGTGGAAAACTCATATGCGTAATGAAAGTGATTTT-GGTGGG 2031 Query 499 AACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGC 558 | | | ||||||||| |||| || ||| | || || |||| ||||| ||| Sbjct 2032 AT----TTTCGATGCACCATCAACCGGTCAGGATTTTTTATGAAGGATCTGAGTCTAAGC 2087 Query 559 ATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAA 618 ||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 2088 ATATTTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGTCAGAGGAAA 2147 Query 619 CTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGG 678 ||||| |||||||||| |||||||||| |||||||||||||||||||||||||||||||| Sbjct 2148 CTCTGATGGAGGCTCGTAGCGGTTCTGACGTGCAAATCGATCGTCAAATTTGGGTATAGG 2207 Query 679 GGCGA 683 ||||| Sbjct 2208 GGCGA 2212 Score = 208 bits (230), Expect = 3e-51 Identities = 159/188 (85%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82 ||||| | | ||| | |||||| |||||||||||||||| | ||||||| ||||||| Sbjct 1393 TGTGATACACTTTCAAAGAGTCGGATTGTTTGGGAATGCAGTCCAAAATGGGTGGTAAAT 1452 Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 142 ||| |||||||||||||| |||| |||||||||||||| ||||||| |||| |||||| Sbjct 1453 TTCATCTAAAGCTAAATACTGGCGAGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGA 1512 Query 143 TGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTT 202 ||||||| |||||| ||||||||||||| || |||||||||||| ||||||||||| || Sbjct 1513 TGAAAAGAACTTTGAAAAGAGAGTTAAACAGTACGTGAAATTGTCAAAAGGGAAGCGTTT 1572 Query 203 GCAACCAG 210 | ||||| Sbjct 1573 GACACCAG 1580 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2076685781950