Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cylicostephanus_20goldi_20[genbank_20GCA_5F000951155.1_202014-10-12] 154,509 sequences; 173,362,437 total letters Query= AAMG01000538.1 Length=248 Score E Sequences producing significant alignments: (Bits) Value seq7671 214 2e-53 seq72248 122 1e-25 >seq7671 Length=2526 Score = 214 bits (236), Expect = 2e-53 Identities = 200/252 (79%), Gaps = 7/252 (3%) Strand=Plus/Plus Query 3 TATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTC-GCACG 61 || |||||| ||||||||||||||||| || ||||| ||| ||||| | |||| ||| Sbjct 78 TAACCTTCCGGCACCGGGCAGGCGTCAGACCCTATACGTCGTCTTAC-GACTTCAGCAGA 136 Query 62 GACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAA 121 | ||||||||||| |||||||||| || | ||| |||| ||||| || |||||| Sbjct 137 GTCCTGTGTTTTTGATAAACAGTCGTTTGGGCCAATTTTCTGTGACCAGCAAAAGCTCAG 196 Query 122 CACG-----TCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGC 176 || | | ||||| | ||||||||||||||||||||||||||||| ||||||| Sbjct 197 CAGGCAAGCTGCATCACCTACGCTGGCACCCCTTCTCCCGAAGTTACGGGGCAATTTTGC 256 Query 177 CGAATTCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGT 236 ||| ||||||||||| |||| ||||| |||||| |||| ||||||| |||||||||| Sbjct 257 CGAGTTCCTTAACCATGGTTCTCCCGATCGCCTTGGTATGCTCTACCCACCCACCTGTGT 316 Query 237 CGGTTTACGGTA 248 |||||| ||||| Sbjct 317 CGGTTTGCGGTA 328 >seq72248 Length=923 Score = 122 bits (134), Expect = 1e-25 Identities = 88/102 (86%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 147 CCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTAACCACAGTTCACCCGAACG 206 ||||||||||||||||||| |||||||||| | |||||| ||| ||||| | | | || Sbjct 22 CCTTCTCCCGAAGTTACGGCACCATTTTGCCTAGTTCCTTCACCCGAGTTCTCTCAAGCG 81 Query 207 CCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACGGTA 248 |||| ||||||||||||||||||||||||||||||| |||| Sbjct 82 CCTTGGTATTCTCTACCTGACCACCTGTGTCGGTTTGGGGTA 123 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 693360617957