Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cylicostephanus_20goldi_20[genbank_20GCA_5F000951155.1_202014-10-12] 154,509 sequences; 173,362,437 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq7671 230 6e-58 seq72248 125 2e-26 >seq7671 Length=2526 Score = 230 bits (254), Expect = 6e-58 Identities = 239/310 (77%), Gaps = 4/310 (1%) Strand=Plus/Plus Query 121 TTAGGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTA 180 ||||||||||||| |||||||||||||||||||||||||| ||| |||||| | | Sbjct 1 TTAGGACCGTTATAGTTACGGCCGCCGTTTACCGGGGCTTAGATTCGCCGCTTCGGATAA 60 Query 181 G--CTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCAC 238 ||||| | | ||||||||||||||||||||||||||| |||||||||||| | Sbjct 61 ATCCTAACGGCTCCTCGTAACCTTCCGGCACCGGGCAGGCGTCAGACCCTATACGTCGTC 120 Query 239 TTTCGTGTTT-GCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCG 297 || || || ||||||| |||||||||| ||||||||||| |||| | ||| | Sbjct 121 TTACGACTTCAGCAGAGTCCTGTGTTTTTGATAAACAGTCGTTTGGGCCAATTTTCTGTG 180 Query 298 ACCGGCATGAGCTTACGGAGCAAG-TCCTTCACCCTCACCGGCGCACCTTCTCCCGAAGT 356 ||| ||| |||| | ||||| | | ||||| | | ||| | |||||||||||||| Sbjct 181 ACCAGCAAAAGCTCAGCAGGCAAGCTGCATCACCTACGCTGGCACCCCTTCTCCCGAAGT 240 Query 357 TACGGTGCCTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTCT 416 ||||| || ||||||| |||||||| || |||||| | | ||||||||||| |||| Sbjct 241 TACGGGGCAATTTTGCCGAGTTCCTTAACCATGGTTCTCCCGATCGCCTTGGTATGCTCT 300 Query 417 ACCCAACCAC 426 ||||| |||| Sbjct 301 ACCCACCCAC 310 >seq72248 Length=923 Score = 125 bits (138), Expect = 2e-26 Identities = 78/84 (93%), Gaps = 0/84 (0%) Strand=Plus/Plus Query 343 CCTTCTCCCGAAGTTACGGTGCCTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCG 402 ||||||||||||||||||| || ||||||||||||||||| |||||||||||||||||| Sbjct 22 CCTTCTCCCGAAGTTACGGCACCATTTTGCCTAGTTCCTTCACCCGAGTTCTCTCAAGCG 81 Query 403 CCTTGGTATTCTCTACCCAACCAC 426 ||||||||||||||||| ||||| Sbjct 82 CCTTGGTATTCTCTACCTGACCAC 105 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1258851950528