Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cylicostephanus_20goldi_20[genbank_20GCA_5F000951155.1_202014-10-12] 154,509 sequences; 173,362,437 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq119447 80.6 5e-13 >seq119447 Length=643 Score = 80.6 bits (88), Expect = 5e-13 Identities = 121/170 (71%), Gaps = 9/170 (5%) Strand=Plus/Minus Query 30 GTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAAC------CCAGCTCACG 83 |||| ||||||||| ||||||| || ||| || ||||||| | |||||| Sbjct 245 GTCAACAGTAGGGTGAAACTAAGCTATCTTGCGATGGTCTAACAATAAGTCTAGCTCAAT 186 Query 84 TTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAA 143 || | | || | | | ||||| |||||||| | ||||||||| || || || |||| Sbjct 185 TTTCTTTTT-GCAGTTAAACAACTCAACGCTTGGCTAATTCTGCTACGTAATTATGGGAA 127 Query 144 GAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTG 193 |||||||||| ||| ||||| ||| || || ||| | ||||||||| Sbjct 126 GAGCCGACATTGAAAAATCAAGAAG--TCGAAGCGATGGATGCTTGGCTG 79 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 853079875104