Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cylicostephanus_20goldi_20[genbank_20GCA_5F000951155.1_202014-10-12] 154,509 sequences; 173,362,437 total letters Query= AAMG01001291.1 Length=420 Score E Sequences producing significant alignments: (Bits) Value seq7671 264 3e-68 >seq7671 Length=2526 Score = 264 bits (292), Expect = 3e-68 Identities = 318/413 (77%), Gaps = 17/413 (4%) Strand=Plus/Plus Query 3 TCCGATCCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTA 62 ||| ||||||||||||| || || | ||| |||| ||| ||||||| |||||| | Sbjct 1149 TCCTATCCACAGGTCATCCC-CTCAGATTT-CAACCTAAGTGGGTTCGGCCCTCCACGAA 1206 Query 63 GTAGTTACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTT 122 || |||||| ||| || ||||||||| |||||| || || ||||| || ||||| Sbjct 1207 GTC-TTACCCCCGCTT-CAGCCTGCCCAT-GGATAGCTCACCTGGTTT-CGCGTCTACGA 1262 Query 123 CCCAGCGACT-AGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTATTCGGTTA 181 | | ||||| | ||||||| ||||||||||| | |||| || ||| | | | | ||| Sbjct 1263 CATA-CGACTCAAACGCCCTCTTAAGACTCGCTCT-CGCTGCGGCTCGCTTTTAAGCTTA 1320 Query 182 AGCTTTGCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAAC 241 | || ||| | | ||| |||||| | |||| ||||||||| |||| ||||||| | Sbjct 1321 ACCTC-GCCGCATATCGTAACTCGCTGGCTCATTCTACAAAAGGCACGCCGTCACCCCGC 1379 Query 242 AAAGTG-GGCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTC 300 |||| | |||||| |||||||||| ||| |||||||||| |||||||||||||||| | Sbjct 1380 AAAGCGAGGCTCCGACTGCTTGTAGGCACGCGGTTTCAGGTACTATTTCACTCCCCTCAC 1439 Query 301 CGGGGTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAG--TAGTA 358 ||||| |||||| |||||||||||||||||| ||||||||||||||| ||| |||| Sbjct 1440 -GGGGTACTTTTCACCTTTCCCTCACGGTACTTGTTCACTATCGGTCA--CAGGAGAGTA 1496 Query 359 TTTAGCCTTGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCG 411 ||||| ||||||| ||||||||||| ||| || ||||| |||| |||| Sbjct 1497 TTTAGGTTTGGAGGGTGGTCCCCCCAGCTTCCCACCGGGTTTCACGTG-TCCG 1548 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1239681616256