Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cylicostephanus_20goldi_20[genbank_20GCA_5F000951155.1_202014-10-12] 154,509 sequences; 173,362,437 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq10916 306 7e-81 >seq10916 Length=2236 Score = 306 bits (338), Expect = 7e-81 Identities = 258/312 (83%), Gaps = 5/312 (2%) Strand=Plus/Plus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGG-GTCGCCGGCTTCTTA 78 || ||||||||||||||||||||||| | || ||| || || ||||||| Sbjct 53 GAACGAGACCTTAACCTGCTAAATAGTTACGCGAATTTTTTATTCGTGGCTAACTTCTTA 112 Query 79 GAGGGACTATCGGCTCA-AGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCT 137 |||||||||| | | | | ||||||||||||||||||||||||||||||||||||| Sbjct 113 GAGGGACTATAGATTTTTAATCTATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCT 172 Query 138 TAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA-CCTTGG 196 ||||||||||||||||||||||||||||||||| || ||||||||| ||| ||||| Sbjct 173 TAGATGTTCTGGGCCGCACGCGCGCTACACTGATGAAGTCAACGAGTT--TCATCCTTGA 230 Query 197 CCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTA 256 ||||||||| |||||||||| | ||||| ||||||||||||||| | |||||||| Sbjct 231 TCGGAAGGTCCGGGTAATCTTTTGAAACTTCATCGTGCTGGGGATAGTCCCTTGCAATTT 290 Query 257 TTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCC 316 ||| ||| |||||||||| ||||||||||| | ||||||| | |||||||||||||||| Sbjct 291 TTGGACTTTAACGAGGAATTCCTAGTAAGCGTGAGTCATCAACTCGCGTTGATTACGTCC 350 Query 317 CTGCCCTTTGTA 328 |||||||||||| Sbjct 351 CTGCCCTTTGTA 362 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 945736490752