Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cylicostephanus_20goldi_20[genbank_20GCA_5F000951155.1_202014-10-12] 154,509 sequences; 173,362,437 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq35756 147 7e-33 seq38386 145 2e-32 seq21877 98.7 3e-18 seq11113 86.0 2e-14 >seq35756 Length=1367 Score = 147 bits (162), Expect = 7e-33 Identities = 128/157 (82%), Gaps = 8/157 (5%) Strand=Plus/Plus Query 325 CAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCG 384 ||||| || ||| |||||||||||||||||||||||| |||| |||||||||||| || Sbjct 16 CAAGCTCGCTCCTTTGGCTGTGGTTTCGCTAGATAGT---TAGG-ACAGTGGGAATCACG 71 Query 385 TTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGT 444 |||||| |||| ||| |||| || |||| | |||| ||||||||||| |||||| | Sbjct 72 TTAATCTATTCGTGCATGTCAGTAGTTAGCT----AGGCTTTTGGCTACCTCAAGAGATT 127 Query 445 CATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAA 481 | ||||||| || || |||||||||| |||| | ||| Sbjct 128 CGTAGTTACCCCTGCTGTTTACCCGCACTTGCTCGAA 164 >seq38386 Length=1320 Score = 145 bits (160), Expect = 2e-32 Identities = 82/83 (99%), Gaps = 0/83 (0%) Strand=Plus/Plus Query 461 GTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCA 520 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 GTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCA 60 Query 521 CATTGCGTCAACATCACTTTCTG 543 ||||||||||||| ||||||||| Sbjct 61 CATTGCGTCAACACCACTTTCTG 83 >seq21877 Length=1708 Score = 98.7 bits (108), Expect = 3e-18 Identities = 132/177 (75%), Gaps = 14/177 (8%) Strand=Plus/Minus Query 340 GGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGC 399 ||||||||||| |||| || |||| ||| || |||||| | |||| |||| ||| Sbjct 440 GGCTGTGGTTTTGCTA---AG-AGATGAGGATGATGAGAATCT-GCTAATTTATTCGTGC 386 Query 400 GCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGC 459 |||||| || |||| |||| |||||||||||||| || | ||| |||| |||||||| Sbjct 385 GCGTCAGTAGTTAGCTGAC-AGGCATTTGGCTACTTTGGGGGAGCCATA---ACTCCCGC 330 Query 460 CGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAA 516 | ||| |||| |||| | ||||| || | ||| ||||| | |||||| |||| Sbjct 329 CATTT-CCCGTGCTTACTCGAATTACTACGATTTTACATT----GTACTGGGTAGAA 278 >seq11113 Length=2222 Score = 86.0 bits (94), Expect = 2e-14 Identities = 96/125 (77%), Gaps = 10/125 (8%) Strand=Plus/Minus Query 399 CGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCG 458 ||||||| || |||| ||| | ||| |||| ||||||||||||||||| ||||||||| Sbjct 398 CGCGTCAGTAGTTAGCTGA-GTGGC--TTGGTTACCTTAAGAGAGTCATGGTTACTCCCA 342 Query 459 CCGTTTACCCGCGCTTGGTTGAAT---TTCTTCACTTTGACATTCAGAGCACTGGGCAGA 515 ||||||||||||||| ||||| | || | ||| || ||| ||||| ||||| Sbjct 341 TCGTTTACCCGCGCTTACCTGAATTAGTACTACGATTTAACGTTC----CACTGAGCAGA 286 Query 516 AATCA 520 || || Sbjct 285 AAACA 281 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1632673468832