Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cylicostephanus_20goldi_20[genbank_20GCA_5F000951155.1_202014-10-12] 154,509 sequences; 173,362,437 total letters Query= NC_028482.1 Length=11877 Score E Sequences producing significant alignments: (Bits) Value seq2389 78.8 7e-11 >seq2389 Length=3524 Score = 78.8 bits (86), Expect = 7e-11 Identities = 108/150 (72%), Gaps = 1/150 (1%) Strand=Plus/Plus Query 1927 AAAACACACCTTGCGTACAACAAGACACTATATTATGTCCCAGACGAGTCTGGAACATAC 1986 ||||| || || | ||| | | | |||| ||||| |||||| | |||||| | Sbjct 1210 AAAACTCATCTCGAATACCAGAGGTCACTGACGTATGTGCCAGACATAGCAGGAACACGC 1269 Query 1987 TACTGGCATGGTCAAGATGGAGGAATTGAAGGCCTTAATCAAGACACATGGGTGGTGGTT 2046 || ||| ||||||||| || |||||||| ||||||||||| |||||||| || | Sbjct 1270 TATTGGTTATATCAAGATGGCGGTATTGAAGGTCTTAATCAAGATACATGGGTTGTCCCT 1329 Query 2047 TACATCAGCCAAATCAAGACCGCGTTTAGC 2076 |||||| |||||||| | || |||||| Sbjct 1330 TACATCGCTCAAATCAAATCAGC-TTTAGC 1358 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 37825336521516