Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cylicostephanus_20goldi_20[genbank_20GCA_5F000951155.1_202014-10-12] 154,509 sequences; 173,362,437 total letters Query= NC_031940.1 Length=77375 Score E Sequences producing significant alignments: (Bits) Value seq10918 513 7e-141 seq17020 159 2e-34 >seq10918 Length=2235 Score = 513 bits (568), Expect = 7e-141 Identities = 331/362 (91%), Gaps = 0/362 (0%) Strand=Plus/Minus Query 72967 TTGTGCAGAACGCATCACAATGAGTTACATGCGGACACCGTGGCATTCGAAGAGAAATAC 73026 |||||||||| ||||||||| ||| | ||| |||| || |||||||| |||||||| || Sbjct 2234 TTGTGCAGAAAGCATCACAACGAGCTGCATACGGATACAGTGGCATTTGAAGAGAAGTAT 2175 Query 73027 GGCTCTCAACTGGAGTTGATATTTCGTTTTATCGATCGTGCGCTGGCAATAGGCGTTCTG 73086 ||||| ||||||||| |||||||||||||||||||||| ||||||||||| ||||| ||| Sbjct 2174 GGCTCCCAACTGGAGCTGATATTTCGTTTTATCGATCGCGCGCTGGCAATTGGCGTACTG 2115 Query 73087 GCGTAAGTGGAGAACGAGCATGAACCTTGAAGCCTTACCAAAATATTACTCCCCAAAATC 73146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2114 GCGTAAGTGGAGAACGAGCATGAACCTTGAAGCCTTACCAAAATATTACTCCCCAAAATC 2055 Query 73147 TCCAAAATTGAGCGATGACGCACCGGCGACAGGCTCAGGTGGTTTAACGATTACGGATGT 73206 ||||||||||||||||||||| || ||||||||| | ||| ||||||| ||||||||||| Sbjct 2054 TCCAAAATTGAGCGATGACGCTCCAGCGACAGGCACCGGTTGTTTAACAATTACGGATGT 1995 Query 73207 GATGGCTGCGCAGGGGATGGTGCAGTCGAAAGCACCGCTTGGGTTTGCCTTATTCCTGGC 73266 ||||| ||||||||||||||||||||||||||||| |||||||| |||||||| ||||| Sbjct 1994 AATGGCAGCGCAGGGGATGGTGCAGTCGAAAGCACCACTTGGGTTGGCCTTATTTCTGGC 1935 Query 73267 AAAAGTTGGTGTTCAGGATCCTCAGTTTGCGATTGAAGGTCTACTCAATCACGCGATGGC 73326 |||||||||||||||||| |||||||||||||||||||| || || ||| |||||||||| Sbjct 1934 AAAAGTTGGTGTTCAGGACCCTCAGTTTGCGATTGAAGGCCTGCTAAATTACGCGATGGC 1875 Query 73327 AC 73328 || Sbjct 1874 AC 1873 Score = 513 bits (568), Expect = 7e-141 Identities = 331/362 (91%), Gaps = 0/362 (0%) Strand=Plus/Minus Query 33504 TTGTGCAGAACGCATCACAATGAGTTACATGCGGACACCGTGGCATTCGAAGAGAAATAC 33563 |||||||||| ||||||||| ||| | ||| |||| || |||||||| |||||||| || Sbjct 2234 TTGTGCAGAAAGCATCACAACGAGCTGCATACGGATACAGTGGCATTTGAAGAGAAGTAT 2175 Query 33564 GGCTCTCAACTGGAGTTGATATTTCGTTTTATCGATCGTGCGCTGGCAATAGGCGTTCTG 33623 ||||| ||||||||| |||||||||||||||||||||| ||||||||||| ||||| ||| Sbjct 2174 GGCTCCCAACTGGAGCTGATATTTCGTTTTATCGATCGCGCGCTGGCAATTGGCGTACTG 2115 Query 33624 GCGTAAGTGGAGAACGAGCATGAACCTTGAAGCCTTACCAAAATATTACTCCCCAAAATC 33683 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2114 GCGTAAGTGGAGAACGAGCATGAACCTTGAAGCCTTACCAAAATATTACTCCCCAAAATC 2055 Query 33684 TCCAAAATTGAGCGATGACGCACCGGCGACAGGCTCAGGTGGTTTAACGATTACGGATGT 33743 ||||||||||||||||||||| || ||||||||| | ||| ||||||| ||||||||||| Sbjct 2054 TCCAAAATTGAGCGATGACGCTCCAGCGACAGGCACCGGTTGTTTAACAATTACGGATGT 1995 Query 33744 GATGGCTGCGCAGGGGATGGTGCAGTCGAAAGCACCGCTTGGGTTTGCCTTATTCCTGGC 33803 ||||| ||||||||||||||||||||||||||||| |||||||| |||||||| ||||| Sbjct 1994 AATGGCAGCGCAGGGGATGGTGCAGTCGAAAGCACCACTTGGGTTGGCCTTATTTCTGGC 1935 Query 33804 AAAAGTTGGTGTTCAGGATCCTCAGTTTGCGATTGAAGGTCTACTCAATCACGCGATGGC 33863 |||||||||||||||||| |||||||||||||||||||| || || ||| |||||||||| Sbjct 1934 AAAAGTTGGTGTTCAGGACCCTCAGTTTGCGATTGAAGGCCTGCTAAATTACGCGATGGC 1875 Query 33864 AC 33865 || Sbjct 1874 AC 1873 Score = 489 bits (542), Expect = 8e-134 Identities = 366/427 (86%), Gaps = 3/427 (1%) Strand=Plus/Minus Query 34108 GAAGTCAGCACAGCGTGCAGAGGGTGTAAGGGTAAAGGTATTGTCCTGGATGAAAAAAGG 34167 |||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| Sbjct 1717 GAAGTCAGCACAGCGTGCAGAGGGTGTAAGGGTAAAGGGATTGTTCTGGATGAAAAAAGA 1658 Query 34168 ACCCGACTTCATGGCACGCCTGTTTATAAGATTTGTGGGCGTTGCAATGGAAACCGGTTT 34227 ||||| |||||||| || || |||||||||||||||||||| ||||||||||||||| Sbjct 1657 ACCCGGTTTCATGGCGTACCGGTATATAAGATTTGTGGGCGTTGTAATGGAAACCGGTTT 1598 Query 34228 AGTCGTTTACCAACCACGCTGGCGCGGCATCATGTCCAGAAGCTGGTACCAGACCTGACG 34287 ||||||||||| ||||||||||| || | |||||||||||||||||||||||||||||| Sbjct 1597 AGTCGTTTACCGACCACGCTGGCACGACGTCATGTCCAGAAGCTGGTACCAGACCTGACC 1538 Query 34288 GATTATCAGTGGTACAAAGGATATGCAGATATCATTGATAAACTGGTGACAAAGTGCTGG 34347 |||||||||||||| || || ||||| || |||||| ||||||||| |||||||||||| Sbjct 1537 GATTATCAGTGGTATAAGGGGTATGCGGACGTCATTGGTAAACTGGTAACAAAGTGCTGG 1478 Query 34348 CAGGAAGAAGCATATGCTGAGGCGCAATTAAGAAAAGTCACGAGATAAATGATTTTCGCC 34407 |||||||||||||| || || |||||||| || || || ||||||||||||||||| || Sbjct 1477 CAGGAAGAAGCATACGCGGAAGCGCAATTGAGGAAGGTGACGAGATAAATGATTTTTGCT 1418 Query 34408 GAAGATGGCGACATGATTCTTGCATTTTTCAAAAAATCTGGTTAGGATTCTCCTAACGAT 34467 ||||||||||||||||| ||||||||||||||||| ||| || |||| || |||||| Sbjct 1417 GAAGATGGCGACATGATGTTTGCATTTTTCAAAAAACATGGATAAGATTTTCTCAACGAT 1358 Query 34468 GGGCTTTGTATGTCTGCCGTTAACGAAATCATAACAAACCTCGCT--TCGGCGGGGTTTT 34525 ||||||||| | || | |||| | |||| | | ||| | |||| | ||||| |||| Sbjct 1357 GGGCTTTGTGTATCCGACGTTTA-GAAAAAAGTAGAAAACCCGCTTATAAGCGGGTTTTT 1299 Query 34526 TTGCTTT 34532 |||||| Sbjct 1298 GTGCTTT 1292 Score = 486 bits (538), Expect = 9e-133 Identities = 366/427 (86%), Gaps = 4/427 (1%) Strand=Plus/Minus Query 73571 GAAGTCAGCACAGCGTGCAGAGGGTGTAAGGGTAAAGGTATTGTCCTGGATGAAAAAAGG 73630 |||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| Sbjct 1717 GAAGTCAGCACAGCGTGCAGAGGGTGTAAGGGTAAAGGGATTGTTCTGGATGAAAAAAGA 1658 Query 73631 ACCCGACTTCATGGCACGCCTGTTTATAAGATTTGTGGGCGTTGCAATGGAAACCGGTTT 73690 ||||| |||||||| || || |||||||||||||||||||| ||||||||||||||| Sbjct 1657 ACCCGGTTTCATGGCGTACCGGTATATAAGATTTGTGGGCGTTGTAATGGAAACCGGTTT 1598 Query 73691 AGTCGTTTACCAACCACGCTGGCGCGGCATCATGTCCAGAAGCTGGTACCAGACCTGACG 73750 ||||||||||| ||||||||||| || | |||||||||||||||||||||||||||||| Sbjct 1597 AGTCGTTTACCGACCACGCTGGCACGACGTCATGTCCAGAAGCTGGTACCAGACCTGACC 1538 Query 73751 GATTATCAGTGGTACAAAGGATATGCAGATATCATTGATAAACTGGTGACAAAGTGCTGG 73810 |||||||||||||| || || ||||| || |||||| ||||||||| |||||||||||| Sbjct 1537 GATTATCAGTGGTATAAGGGGTATGCGGACGTCATTGGTAAACTGGTAACAAAGTGCTGG 1478 Query 73811 CAGGAAGAAGCATATGCTGAGGCGCAATTAAGAAAAGTCACGAGATAAATGATTTTCGCC 73870 |||||||||||||| || || |||||||| || || || ||||||||||||||||| || Sbjct 1477 CAGGAAGAAGCATACGCGGAAGCGCAATTGAGGAAGGTGACGAGATAAATGATTTTTGCT 1418 Query 73871 GAAGATGGCGACATGATTCTTGCATTTTTCAAAAAATCTGGTTAGGATTCTCCTAACGAT 73930 ||||||||||||||||| ||||||||||||||||| ||| || |||| || |||||| Sbjct 1417 GAAGATGGCGACATGATGTTTGCATTTTTCAAAAAACATGGATAAGATTTTCTCAACGAT 1358 Query 73931 GGGCTTTGTATGTCTGCCGTTAACGAAATCATAACAAACCTCGCT--TCGGCGGGGTTTT 73988 ||||||||| | || | |||| | |||| | | ||| | |||| | ||||| |||| Sbjct 1357 GGGCTTTGTGTATCCGACGTTTA-GAAAAAAGTAGAAAACCCGCTTATAAGCGGGTTTTT 1299 Query 73989 -TGCTTT 73994 |||||| Sbjct 1298 GTGCTTT 1292 >seq17020 Length=1896 Score = 159 bits (176), Expect = 2e-34 Identities = 111/126 (88%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 21872 ACAGGCTCAGCTTCCAGCGATGCCAGCGCGATACGCGCCAGTTCCATTTGTTCGCCACGG 21931 || ||||| ||||||||| ||||||| || || || |||||||||||||||||||||||| Sbjct 1253 ACTGGCTCTGCTTCCAGCAATGCCAGTGCAATCCGTGCCAGTTCCATTTGTTCGCCACGG 1312 Query 21932 GTAAGCCCGTTTTCAAGAGGACTTTTAATGAACAATTCGATACGTTCTTTGGTAATAGTG 21991 ||||| ||||| ||||| ||| |||||||||| ||||||||||||||||||||||||| Sbjct 1313 GTAAGTCCGTTATCAAGCGGATTTTTAATGAATAATTCGATACGTTCTTTGGTAATAGAA 1372 Query 21992 GTCATG 21997 ||||| Sbjct 1373 TTCATG 1378 Score = 159 bits (176), Expect = 2e-34 Identities = 111/126 (88%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 61463 ACAGGCTCAGCTTCCAGCGATGCCAGCGCGATACGCGCCAGTTCCATTTGTTCGCCACGG 61522 || ||||| ||||||||| ||||||| || || || |||||||||||||||||||||||| Sbjct 1253 ACTGGCTCTGCTTCCAGCAATGCCAGTGCAATCCGTGCCAGTTCCATTTGTTCGCCACGG 1312 Query 61523 GTAAGCCCGTTTTCAAGAGGACTTTTAATGAACAATTCGATACGTTCTTTGGTAATAGTG 61582 ||||| ||||| ||||| ||| |||||||||| ||||||||||||||||||||||||| Sbjct 1313 GTAAGTCCGTTATCAAGCGGATTTTTAATGAATAATTCGATACGTTCTTTGGTAATAGAA 1372 Query 61583 GTCATG 61588 ||||| Sbjct 1373 TTCATG 1378 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 247009184787064