Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyocaulus_20viviparus_20[genbank_20GCA_5F000816705.1_202015-03- 12] 7,157 sequences; 160,963,781 total letters Query= AAMG01001083.1 Length=339 Score E Sequences producing significant alignments: (Bits) Value seq119 199 8e-49 >seq119 Length=300589 Score = 199 bits (220), Expect = 8e-49 Identities = 227/301 (75%), Gaps = 3/301 (1%) Strand=Plus/Plus Query 40 TCAAGGAGCCGCTGTTGGGATACTACCCCT-GTTGTATTGGATTTCTAACCGGACGACGT 98 ||| |||| ||| ||| ||||||||| | ||| | || | || ||||| | | ||| Sbjct 209 TCATGGAGTCGCCCGTGGAATACTACCCTTCGTTATTTTAGCTT-CTAACACGCTGCCGT 267 Query 99 ATAACCGTTGACGGGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAG 158 |||||| | ||||||||| | |||||||||||||||||||||||||||||||| Sbjct 268 -TAACCGGTAGGTGGACAGTGTTTGGTGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAA 326 Query 159 AGTAACGGAGGCGCCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCACAGTGCAAA 218 | ||||||||||| ||| | |||||||| || |||||| | || | || | || Sbjct 327 GGAAACGGAGGCGCGCAATGGTACCCTCAATACGGTTGGAAATCGTGTTCCGAGCGTAAT 386 Query 219 GGCAAAAGGGTGTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAA 278 || | ||||||| |||||||||| | | | || |||||| | |||| | || | || Sbjct 387 GGTATAAGGGTGCTTGACTGCGAGAGCAACGGCTCGAGCAGGTAGGAAACTAGGTCATAG 446 Query 279 TGATCCGGCGGTGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGAT 338 |||||||| | | | | |||||| |||| |||||||||||||||||||||| |||||||| Sbjct 447 TGATCCGGTGTTTCAGTATGGAATGGCCATCGCTCGACGGATAAAAGCTACTCTGGGGAT 506 Query 339 A 339 | Sbjct 507 A 507 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 982329689632