Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyocaulus_20viviparus_20[genbank_20GCA_5F000816705.1_202015-03- 12] 7,157 sequences; 160,963,781 total letters Query= AAMG01001178.1 Length=367 Score E Sequences producing significant alignments: (Bits) Value seq556 170 4e-40 >seq556 Length=72008 Score = 170 bits (188), Expect = 4e-40 Identities = 158/196 (81%), Gaps = 6/196 (3%) Strand=Plus/Minus Query 2 TTTACAATCCGAAG---ACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGC 58 |||||||| |||| |||||| | || |||||||||||| || ||||||||||||| Sbjct 71731 TTTACAATTCGAAACGAACCTTCAT-CATCCACGCGGCATTG-CTCCATCAGGCTTTCGC 71674 Query 59 CCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCC 118 ||||||| || |||||||||||||||||||||||||||| || |||||||||||| || Sbjct 71673 CCATTGTGAAAAATTCCCCACTGCTGCCTCCCGTAGGAGTAGGGGCCGTGTCTCAGTCCC 71614 Query 119 AGTGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCT 178 |||| || || |||||||| || | | || |||||||||||||||||||||| Sbjct 71613 CTTGTGGCTATTCTACCTCTCAGCATAGCTCCTCGTCATCGCCTTGGTGAGCCATTACCT 71554 Query 179 C-ACCAACTAGCTAAT 193 | |||||| |||| || Sbjct 71553 CAACCAACAAGCTGAT 71538 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1071923276960