Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyocaulus_20viviparus_20[genbank_20GCA_5F000816705.1_202015-03- 12] 7,157 sequences; 160,963,781 total letters Query= AAMG01001844.1 Length=290 Score E Sequences producing significant alignments: (Bits) Value seq556 167 4e-39 >seq556 Length=72008 Score = 167 bits (184), Expect = 4e-39 Identities = 169/217 (78%), Gaps = 5/217 (2%) Strand=Plus/Minus Query 68 TATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCACTCAAGAA 127 |||||||| ||||||||||||| |||||||| |||| |||| | |||||| || Sbjct 72007 TATATCTAAGCATTTCACCGCTCCACACGGAGTTCCAGAACTCTCTACCGCACTCTAGCC 71948 Query 128 AAACAGTTTCAAATGCAGGCTATGGGTTGAGC--CCATAGTTTTCACATCTGACTTGCCT 185 |||||||| |||||| || | || ||| | ||| ||| ||| | |||||||| Sbjct 71947 GGACAGTTTCCAATGCAAATTACAG-TTAAGCTGCAATA--TTTAACACCAGACTTGCCC 71891 Query 186 TCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTA 245 |||||| | | | |||||| |||||| |||||||||||||||||| ||||| |||||| Sbjct 71890 AGCCGCCTGCGCTCGCTTTACGCCCAATGAATCCGGATAACGCTTGCAACCTATGTATTA 71831 Query 246 CCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTC 282 ||||| |||||||||| ||||||| ||| ||||||| Sbjct 71830 CCGCGACTGCTGGCACATAGTTAGTCGTTACTTATTC 71794 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 828742536447