Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyocaulus_20viviparus_20[genbank_20GCA_5F000816705.1_202015-03- 12] 7,157 sequences; 160,963,781 total letters Query= AAMG01001851.1 Length=140 Score E Sequences producing significant alignments: (Bits) Value seq119 127 1e-27 >seq119 Length=300589 Score = 127 bits (140), Expect = 1e-27 Identities = 112/140 (80%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 || ||||||||||| ||||||||||| |||||| | | ||||||||||||||||||| Sbjct 496 TAGCTTTTATCCGTCGAGCGATGGCCATTCCATACTGAAACACCGGATCACTATGACCTA 437 Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACTAT 120 |||| | |||||| || |||||||||||| |||||||| ||| | ||||| | || Sbjct 436 GTTTCCTACCTGCTCGAGCCGTTGCTCTCGCAGTCAAGCACCCTTATACCATTACGCTCG 377 Query 121 CACTACGATTTCCGACCGTA 140 | ||||||||| |||||| Sbjct 376 GAACACGATTTCCAACCGTA 357 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 351976381900