Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyocaulus_20viviparus_20[genbank_20GCA_5F000816705.1_202015-03- 12] 7,157 sequences; 160,963,781 total letters Query= AAMG01001946.1 Length=179 Score E Sequences producing significant alignments: (Bits) Value seq119 127 2e-27 >seq119 Length=300589 Score = 127 bits (140), Expect = 2e-27 Identities = 121/155 (78%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 24 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 83 || ||||||||||| |||||| | ||| ||||||||||||||||||| |||| ||||| Sbjct 484 GTCGAGCGATGGCCATTCCATACTGAAACACCGGATCACTATGACCTAGTTTCCTACCTG 425 Query 84 CTCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACTAACCTCACGATGTC 143 |||||||||| ||||||||||||||| ||||| ||||| | || |||||| || Sbjct 424 CTCGAGCCGTTGCTCTCGCAGTCAAGCACCCTTATACCATTACGCTCGGAACACGATTTC 365 Query 144 CGACCGTGATTAGCTGACCTTCGTGCTCCTCCGTT 178 | ||||| | || ||| | | || |||||||| Sbjct 364 CAACCGTATTGAGGGTACCATTGCGCGCCTCCGTT 330 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 473567163684