Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyocaulus_20viviparus_20[genbank_20GCA_5F000816705.1_202015-03- 12] 7,157 sequences; 160,963,781 total letters Query= AAMG01001962.1 Length=275 Score E Sequences producing significant alignments: (Bits) Value seq119 215 8e-54 >seq119 Length=300589 Score = 215 bits (238), Expect = 8e-54 Identities = 203/259 (78%), Gaps = 0/259 (0%) Strand=Plus/Minus Query 17 CTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGCTATGCACTTGGCAG 76 ||||||||| |||||| ||||| ||| | || | ||| |||||| ||| |||||| Sbjct 816 CTTAGATGCTTTCAGCGTTTATCTATTCGATACGTTGCTACCCAGCGGTGCTTTTGGCAA 757 Query 77 TACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGACAGCTCCTC 136 ||||||||||||| |||||| | | | | ||||||||||||||||| | ||| || || Sbjct 756 AACAACTGGTGCACAAGAGGTATCTTCGTTCCGGTCCTCTCGTACTAGGAACAAATCTTC 697 Query 137 TCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCGACGTTCTGAACCCA 196 ||| |||| || |||| | |||||||||| | ||||||| |||| | |||||||| Sbjct 696 GCAATCTTCCAACAGCCACAATAGATAGGGACCAACCTGTCTCACGACCGTTTGAACCCA 637 Query 197 GCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACTTCAGCCCCAGG 256 ||| ||| ||||||||| ||||||||||| ||||||| | ||| ||||||| | ||| Sbjct 636 ACTCACGTATCTCTTTAATCGGCGAACAGCCGAACCCTTCGAACCAGCTTCAGCTCGAGG 577 Query 257 ATGAGACGAGCCGACATCG 275 |||||| ||| |||||||| Sbjct 576 ATGAGATGAGTCGACATCG 558 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 780745864452