Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyocaulus_20viviparus_20[genbank_20GCA_5F000816705.1_202015-03- 12] 7,157 sequences; 160,963,781 total letters Query= AAMG01002175.1 Length=414 Score E Sequences producing significant alignments: (Bits) Value seq556 165 2e-38 >seq556 Length=72008 Score = 165 bits (182), Expect = 2e-38 Identities = 143/176 (81%), Gaps = 1/176 (1%) Strand=Plus/Minus Query 20 CCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATTGTGCAATATTCCCCA 79 ||||| |||| |||||||||| ||| |||||||||| ||||||||||| || |||||||| Sbjct 71713 CCTTCATCATCCACGCGGCATTGCTCCATCAGGCTTTCGCCCATTGTGAAAAATTCCCCA 71654 Query 80 CTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGGCTGGTCATCCTCT 139 |||||||||||||||||||| || |||||||||||| || ||||||| || ||||| Sbjct 71653 CTGCTGCCTCCCGTAGGAGTAGGGGCCGTGTCTCAGTCCCCTTGTGGCTATTCTACCTCT 71594 Query 140 CAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACC-CCGCCAACTAGCTAAT 194 ||| |||| || |||||| |||| ||||||||| | ||||| |||| || Sbjct 71593 CAGCATAGCTCCTCGTCATCGCCTTGGTGAGCCATTACCTCAACCAACAAGCTGAT 71538 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1222312512832