Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyocaulus_20viviparus_20[genbank_20GCA_5F000816705.1_202015-03- 12] 7,157 sequences; 160,963,781 total letters Query= AAMG01002180.1 Length=500 Score E Sequences producing significant alignments: (Bits) Value seq556 185 3e-44 >seq556 Length=72008 Score = 185 bits (204), Expect = 3e-44 Identities = 256/359 (71%), Gaps = 31/359 (9%) Strand=Plus/Plus Query 161 GCGTCTGATTAGCTAGTTGGTA-AGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGAC 219 ||| || || |||| |||||| |||||| |||| |||||||||| || || ||| Sbjct 71531 GCGGCTTATCAGCTTGTTGGTTGAGGTAATGGCTCACCAAGGCGATGACGAGGAGCTATG 71590 Query 220 CTGAGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAG 279 |||||||| || |||||| || |||||||||||| || ||||||||||||||||| Sbjct 71591 CTGAGAGGTAGAATAGCCACAAGGGGACTGAGACACGGCCCCTACTCCTACGGGAGGCAG 71650 Query 280 CAGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGA 339 ||||||||||| || |||||||||| ||||||||||| ||||| |||||||| ||||| Sbjct 71651 CAGTGGGGAATTTTTCACAATGGGCGAAAGCCTGATGGAGCAATGCCGCGTGGATGATGA 71710 Query 340 AGG---CCTTCGGGTCGTAAAGCTCTGTCCTCAAGGAAG-ATAA---------------- 379 ||| |||| | ||||| || | | ||||| || | Sbjct 71711 AGGTTCGTTTCGAATTGTAAAATCCTTTTATTTGGGAAGAATGATGCTGAAAGGAAATGT 71770 Query 380 --------TGACGGTA-CTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGG 430 |||||||| | | || ||| || ||||||| |||||||||| ||||| Sbjct 71771 TCGGCATTTGACGGTACCATTTTGAATAAGTAACGACTAACTATGTGCCAGCAGTCGCGG 71830 Query 431 TAATACGTAGGGGGCTAGCGTTATCCGGAATTACTGGGGCGTAAAGGGTGCGTAGGTGG 489 |||||| |||| || |||||||||||| ||| | |||||||||| | ||| ||| || Sbjct 71831 TAATACATAGGTTGCAAGCGTTATCCGG-ATTCATTGGGCGTAAAGCGAGCGCAGGCGG 71888 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1497492816768