Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyocaulus_20viviparus_20[genbank_20GCA_5F000816705.1_202015-03- 12] 7,157 sequences; 160,963,781 total letters Query= AAMG01002183.1 Length=408 Score E Sequences producing significant alignments: (Bits) Value seq556 116 9e-24 >seq556 Length=72008 Score = 116 bits (128), Expect = 9e-24 Identities = 150/205 (73%), Gaps = 3/205 (1%) Strand=Plus/Plus Query 19 CGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAATTA 78 || ||||||| |||||||||| ||||||||||| |||| || ||||||||||||| | | Sbjct 71804 CGACTAACTATGTGCCAGCAGTCGCGGTAATACATAGGTTGCAAGCGTTATCCGGATTCA 71863 Query 79 CTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCTATGGCTCAAC 138 ||||||||||| | ||| ||| || | ||||| | || ||| | ||| || Sbjct 71864 TTGGGCGTAAAGCGAGCGCAGGCGGCTGGGCAAGTCTGGTGTTAAATATTGCAGCTTAA- 71922 Query 139 CCCGGGA-CTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCAAGTGGAATTCCTA 197 | | | ||| || ||||||| ||||||||||| | || | ||||| ||| Sbjct 71923 -CTGTAATTTGCATTGGAAACTGTCCGGCTAGAGTGCGGTAGAGAGTTCTGGAACTCCGT 71981 Query 198 GTGTAGCGGTGAAATGCGTAGATAT 222 ||| ||||||||||||| ||||||| Sbjct 71982 GTGGAGCGGTGAAATGCTTAGATAT 72006 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203113886976