Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyocaulus_20viviparus_20[genbank_20GCA_5F000816705.1_202015-03- 12] 7,157 sequences; 160,963,781 total letters Query= AAMG01002207.1 Length=564 Score E Sequences producing significant alignments: (Bits) Value seq119 114 4e-23 >seq119 Length=300589 Score = 114 bits (126), Expect = 4e-23 Identities = 106/133 (80%), Gaps = 1/133 (1%) Strand=Plus/Minus Query 13 TCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCCAACCAGGCTGAG 72 |||||||||||||| ||||| | | |||| ||| || |||| |||||| |||| Sbjct 411 TCTCGCAGTCAAGCACCCTTATACCATTACGCTCGGAACACGATTTCCAACCGTATTGAG 352 Query 73 GGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAGTTAAACTACCCA 132 || ||| ||| ||||||||||| | |||||||| ||| ||||||||||| ||||| |||| Sbjct 351 GGTACCATTGCGCGCCTCCGTTTCCTTTTGGGA-GGCGACCGCCCCAGTCAAACTGCCCA 293 Query 133 CCAGGCACTGTCC 145 ||| |||||||| Sbjct 292 CCAAACACTGTCC 280 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1702278159232