Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyocaulus_20viviparus_20[genbank_20GCA_5F000816705.1_202015-03- 12] 7,157 sequences; 160,963,781 total letters Query= AAMG01002223.1 Length=366 Score E Sequences producing significant alignments: (Bits) Value seq556 122 2e-25 >seq556 Length=72008 Score = 122 bits (134), Expect = 2e-25 Identities = 192/270 (71%), Gaps = 9/270 (3%) Strand=Plus/Minus Query 3 CTGCTGGCACGGAGTTAGCCGATGCTTATTCATAA-GGTACATACAAGCTCCCA-CA--- 57 |||||||||| |||||| || | |||||||| || ||||| ||| || | || Sbjct 71824 CTGCTGGCACATAGTTAGTCGTTACTTATTCAAAATGGTACCGTCAAATGCCGAACATTT 71765 Query 58 CGTGGAAGGTT--TTATTCCCTTATAAAAGAAGTTTACAATCCGTA--GAACCTTCATCC 113 | | || | || ||||| ||||||| | |||||||| || | ||||||||||| Sbjct 71764 CCTTTCAGCATCATTCTTCCCAAATAAAAGGATTTTACAATTCGAAACGAACCTTCATCA 71705 Query 114 TTCACGCTACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCT 173 | ||||| | | ||| |||| || ||| |||||| || ||||| ||||||||||| Sbjct 71704 TCCACGCGGCATTGCTCCATCAGGCTTTCGCCCATTGTGAAAAATTCCCCACTGCTGCCT 71645 Query 174 CCCGTAGGAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCC 233 ||||||||||| || |||||||||||| || ||||| || |||||||| | | Sbjct 71644 CCCGTAGGAGTAGGGGCCGTGTCTCAGTCCCCTTGTGGCTATTCTACCTCTCAGCATAGC 71585 Query 234 TATCCATCGTAGGCTAGGTGGGCCGTTACC 263 | | || | | || |||| ||| ||||| Sbjct 71584 TCCTCGTCATCGCCTTGGTGAGCCATTACC 71555 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1068723505984