Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyocaulus_20viviparus_20[genbank_20GCA_5F000816705.1_202015-03- 12] 7,157 sequences; 160,963,781 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq1054 246 9e-63 seq2805 242 1e-61 seq747 230 7e-58 seq1805 219 1e-54 seq377 123 8e-26 seq1611 120 9e-25 seq1178 114 4e-23 seq1038 107 6e-21 seq3017 105 2e-20 seq2026 102 2e-19 seq958 96.9 1e-17 seq5978 93.3 1e-16 seq1513 93.3 1e-16 seq7088 89.7 2e-15 seq4977 77.0 1e-11 >seq1054 Length=16975 Score = 246 bits (272), Expect = 9e-63 Identities = 325/441 (74%), Gaps = 20/441 (5%) Strand=Plus/Plus Query 43 TATTTATTGTCACTACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCC 102 ||||| | ||||||| ||| | || |||||| ||| || ||||||||||||||||| Sbjct 4609 TATTTTTAGTCACTATCTCATCTCTTCAAGATTGGATAAGTTTCGCGCCTGCTGCCTTCC 4668 Query 103 TTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTA 162 ||||||||||||||||||||| |||||||||||||||| | ||||||| |||| |||||| Sbjct 4669 TTGGATGTGGTAGCCGTTTCTAAGGCTCCCTCTCCGGAGTGGAACCCTTATTCTCCGTTA 4728 Query 163 CCCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTG 222 ||||| |||||||||| | | || |||||||| | |||||||||||||| | || Sbjct 4729 CCCGTAATAACCATGGTAGACTAATAGACTACCATC--AGGTTGATAGGGCAGACACTTT 4786 Query 223 AATGAACCATCGCCGGCTCAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAA--- 279 | | |||| | | | ||| ||| | | |||||| || ||| ||| Sbjct 4787 TTCGGAATATCGGC-AAACTATGCC-GCCGACATGCTGCGTTATTCAGAGTCAGCAAACT 4844 Query 280 GGAGCCCCGAAGGGCGTTGGTTTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTT 339 | |||||| | || ||| |||||||| | || || ||| ||||| ||||| Sbjct 4845 ATACATCCGAAGATCACTG--ATTTGCTCTAATAATTGCATCCTTTCAAAAGTCAGGGTT 4902 Query 340 TT-TAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAA 398 || | |||||||||||||| ||||||||| | ||||||||| | | | || | | || Sbjct 4903 TTATCGCATGTATTAGCTCCAGAATTACCGCAGTTATCCAT-TCGAA---TAATTCCGAA 4958 Query 399 TAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTA 458 |||| | | ||| | ||||||||| |||||||||||||| || || ||| | | Sbjct 4959 TAAATTACATCTGCTCTAATGAGCCGTTCGCAGTTTCACTTTAAAG-TTG-----AACTC 5012 Query 459 GACATGCATGGCTTAATCTTT 479 ||||||||||||||||||||| Sbjct 5013 GACATGCATGGCTTAATCTTT 5033 >seq2805 Length=2752 Score = 242 bits (268), Expect = 1e-61 Identities = 314/425 (74%), Gaps = 19/425 (4%) Strand=Plus/Minus Query 72 GATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCC 131 |||||| ||| || |||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 2740 GATTGGATAAGTTTCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTAAGGCTCC 2681 Query 132 CTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGGCCACTATCC 191 ||||||||| ||||||||| |||| ||||||||||| |||||||||| | | || | Sbjct 2680 CTCTCCGGAGTCGAACCCTTATTCTCCGTTACCCGTAATAACCATGGTAGACTAATAGAC 2621 Query 192 TACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTCAAGGCCATGC 251 ||||||| | |||||||||||||| | || | | |||| | | | | ||| | Sbjct 2620 TACCATC--AGGTTGATAGGGCAGACACTTATTCGGAATATCGGC-GAACTATGCC-GCC 2565 Query 252 GATTCGTTAAGTTATTATGAATCACCAA---GGAGCCCCGAAGGGCGTTGGTTTTTTATC 308 ||| | | |||||| || ||| ||| | |||||| | || ||| || Sbjct 2564 GATATGCTGCGTTATTCAGAGTCAACAAACTATACATCCGAAGATCACTG--ATTTGCTC 2507 Query 309 TAATAAATACACCCCTTCCGAAGTCGGGGTT-TTTAGCATGTATTAGCTCTAGAATTACC 367 |||||| | ||||| ||| ||||| ||||| | | |||||||||||||| ||||||||| Sbjct 2506 TAATAATTGCACCCTTTCAAAAGTCAGGGTTCTATCGCATGTATTAGCTCCAGAATTACC 2447 Query 368 ACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGAGCCATTC 427 | ||||||||| | | | || | | |||||| | | | | | ||||||||| ||| Sbjct 2446 GCAGTTATCCAT-TCGAA---TAATTCCGAATAAATTACATCAGCTCTAATGAGCCGTTC 2391 Query 428 GCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAG 487 ||||||||||| | | ||| | | ||||||||||||||||||||| | || Sbjct 2390 GCAGTTTCACTTGAAAAGTTG-----AACTCGACATGCATGGCTTAATCTTTTAACTGAG 2336 Query 488 CATAT 492 ||||| Sbjct 2335 CATAT 2331 >seq747 Length=42155 Score = 230 bits (254), Expect = 7e-58 Identities = 332/454 (73%), Gaps = 21/454 (5%) Strand=Plus/Minus Query 43 TATTTATTGTCACTACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCC 102 ||||| | ||||||| ||| | || |||||| || || || |||||||||||||| Sbjct 2419 TATTTTTAGTCACTATCTCATCTCTTCAAGATTGGACAAGTTTCGAGCCTGCTGCCTTCC 2360 Query 103 TTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTA 162 ||||| ||||||||||||||| |||||||||||||||| |||||||| |||| |||||| Sbjct 2359 TTGGACGTGGTAGCCGTTTCTAAGGCTCCCTCTCCGGAGTCGAACCC-CATTCTCCGTTA 2301 Query 163 CCCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTG 222 | ||| ||||| |||| | | || |||||||| | |||||||||||||| | || Sbjct 2300 CACGTAATAACCATAGTAGACTAATAGACTACCATC--AGGTTGATAGGGCAGATACTTT 2243 Query 223 AATGAACCATCGCCGGCTCAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCA-AGG 281 | | |||| | | | | ||| |||| | | |||||| || ||| || | Sbjct 2242 TTCGGAATATCGGC-GAACTATGCC-GCCGATATGCTGCGTTATTTAGAGTCAGCATACT 2185 Query 282 AGCC--CCGAAGGGCGTTGGTTTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTT 339 | | |||||| | || ||| |||||||| | ||||| ||| ||||| |||| Sbjct 2184 ATACATCCGAAGATCACTG--ATTTGCTCTAATAATTTCACCCTTTCAAAAGTCAAGGTT 2127 Query 340 TT-TAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAA 398 || | |||||||||||||| ||||||||| | ||||||||| | | | || | | || Sbjct 2126 TTATCGCATGTATTAGCTCCAGAATTACCGCAGTTATCCAT-TCGAA---TAATTCCGAA 2071 Query 399 TAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTA 458 |||| | | ||| | ||||||||| |||||||||||||| || || ||| | || Sbjct 2070 TAAATTACATCTGTTCTAATGAGCCGTTCGCAGTTTCACTTTAAAG-TTG--AACAC--- 2017 Query 459 GACATGCATGGCTTAATCTTTGAGACAAGCATAT 492 ||||||||||||||||||||| | ||||||| Sbjct 2016 GACATGCATGGCTTAATCTTTTAACTGAGCATAT 1983 >seq1805 Length=5963 Score = 219 bits (242), Expect = 1e-54 Identities = 319/441 (72%), Gaps = 20/441 (5%) Strand=Plus/Plus Query 43 TATTTATTGTCACTACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCC 102 ||||| | ||||||| ||| | || |||||| ||| || |||||||| |||||||| Sbjct 101 TATTTTTAGTCACTATCTCATCTCTTCAAGATTGGATAAGTTTCGCGCCTGTTGCCTTCC 160 Query 103 TTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTA 162 ||||||||||||||||||||| |||||||||||||||| ||||||||| |||| |||||| Sbjct 161 TTGGATGTGGTAGCCGTTTCTGAGGCTCCCTCTCCGGAGTCGAACCCTTATTCTCCGTTA 220 Query 163 CCCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTG 222 | ||| |||||||||| | | || |||||||| | |||||||||||||| | | Sbjct 221 CTCGTAATAACCATGGTAGACTAATAGACTACCATC--AGGTTGATAGGGCAGACACCTT 278 Query 223 AATGAACCATCGCCGGCTCAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAA--- 279 | | |||| | | | | ||| |||| | | |||||| || ||| ||| Sbjct 279 TTCGGAATATCGGC-GAACTATGCC-GCCGATATGCTGCGTTATTCAGAGTCAGCAAACT 336 Query 280 GGAGCCCCGAAGGGCGTTGGTTTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTT 339 | ||||| | || ||| |||||||| | ||| | ||| ||||| ||||| Sbjct 337 ATACATCCGAATATCACTG--ATTTGCTCTAATAATTGCACTCTTTCAAAAGTCAGGGTT 394 Query 340 TT-TAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAA 398 || | |||| ||||||||| |||| |||| | ||||||||| | | | || | | || Sbjct 395 TTATCGCATTTATTAGCTCCAGAACTACCGCAGTTATCCAT-TTGAA---TAATTCCGAA 450 Query 399 TAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTA 458 |||| | | ||| | ||||||||| |||||||||||| | || || ||| | | Sbjct 451 TAAATTACATCTGCTCTAATGAGCCGTTCGCAGTTTCATTTTAAAG-TTG-----AACTC 504 Query 459 GACATGCATGGCTTAATCTTT 479 ||||| |||||||||||||| Sbjct 505 GACATTGATGGCTTAATCTTT 525 >seq377 Length=118935 Score = 123 bits (136), Expect = 8e-26 Identities = 119/152 (78%), Gaps = 12/152 (8%) Strand=Plus/Plus Query 72 GATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCC 131 |||||| ||| || || ||||||||||||||||||||||||||||||||| ||||| | Sbjct 76209 GATTGGATAAGTTTAGCATCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTAAGGCTTC 76268 Query 132 CTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGGCCACTATCC 191 ||||||||| ||||||||| |||| |||||| ||| |||||||||| ||| Sbjct 76269 CTCTCCGGAGTCGAACCCTTATTCTACGTTACTCGTAATAACCATGGTAG---ACT---- 76321 Query 192 TACCATCGA--AAGTTGATAGGGCAGAAATTT 221 ||| || | |||||||||| ||| |||| Sbjct 76322 ---CATAGACCAGGTTGATAGGGTAGACATTT 76350 >seq1611 Length=6894 Score = 120 bits (132), Expect = 9e-25 Identities = 128/167 (77%), Gaps = 3/167 (2%) Strand=Plus/Minus Query 51 GTCACTACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGT 110 ||||||| ||| || || ||||| || ||| || | ||| ||||| |||||||| Sbjct 6891 GTCACTATCTCACCTCCTCAAGATTGAATAGTTTTTGCTTCCGCTTCCTTCTTTGGATGT 6832 Query 111 GGTAGCCGTTTCTCAGG-CTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTG 169 |||| ||||||| ||| ||||||||||||| || |||||| |||| |||||| |||| | Sbjct 6831 AGTAGTCGTTTCTAAGGGCTCCCTCTCCGGAGTCTAACCCTCATTCTCCGTTATCCGTAG 6772 Query 170 ATACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGA 216 |||||||||| ||| || |||| ||| ||| |||||||||| Sbjct 6771 TAACCATGGTAGACCAATAGACTACAATC--CGGTTAATAGGGCAGA 6727 >seq1178 Length=13014 Score = 114 bits (126), Expect = 4e-23 Identities = 119/151 (79%), Gaps = 5/151 (3%) Strand=Plus/Plus Query 72 GATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGG-CTC 130 ||||| || ||| ||| | ||||||||| |||||||| |||| ||||||| ||| ||| Sbjct 9860 GATTGAATAGTTTTTGCGTCCGCTGCCTTCTTTGGATGTAGTAGTCGTTTCTAAGGGCTC 9919 Query 131 CCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGGCCACTATC 190 |||||||||| || || ||| |||| |||||| |||| | |||||||||| ||| | Sbjct 9920 CCTCTCCGGAGTCTAA-CCTCATTCTCCGTTATCCGTAGTAACCATGGTAGACCAATGAA 9978 Query 191 CTACCATCGAAAGTTGATAGGGCAGA-AATT 220 |||| ||| | ||| |||||||||| |||| Sbjct 9979 CTACTATC--AGGTTAATAGGGCAGACAATT 10007 >seq1038 Length=20495 Score = 107 bits (118), Expect = 6e-21 Identities = 127/170 (75%), Gaps = 3/170 (2%) Strand=Plus/Minus Query 46 TTATTGTCACTACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTG 105 |||| ||||||| ||| || || |||||| ||| || |||| ||||| |||| || Sbjct 16633 TTATAGTCACTATCTCACCTCCTCAAGATTGGATAAGTTTCGCGTTTGCTGTCTTCTTTC 16574 Query 106 GATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCC 165 ||||||||||| |||||| |||||||||||| || |||||| || |||| |||||| || Sbjct 16573 GATGTGGTAGC-GTTTCTAAGGCTCCCTCTCTAGAGTCGAACACTCATTCTCCGTTAGCC 16515 Query 166 GTTGATACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAG 215 || ||||| ||| | | | |||||||| | ||| | |||| || Sbjct 16514 GTAATAACCATAGTAAACTAATGGACTACCATC--AGGTTAAGAGGGTAG 16467 >seq3017 Length=1878 Score = 105 bits (116), Expect = 2e-20 Identities = 117/155 (75%), Gaps = 1/155 (1%) Strand=Plus/Minus Query 43 TATTTATTGTCACTACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCC 102 ||||| | ||||||| ||| || |||||| ||| || |||| |||||| || Sbjct 1450 TATTTCTAGTCACTATCTCACCTCCCAAAGATTGGATAAGTTTCGCGACTGCTGTATTTT 1391 Query 103 TTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTA 162 || ||||||||||| |||||| ||||||||||| |||| ||||||||| |||| |||||| Sbjct 1390 TTCGATGTGGTAGC-GTTTCTAAGGCTCCCTCTTCGGAGTCGAACCCTTATTCTCCGTTA 1332 Query 163 CCCGTTGATACCATGGTAGGCCACTATCCTACCAT 197 |||| ||||| |||| | | | ||||||| Sbjct 1331 GCCGTAATAACCATAGTAGACTAATGGACTACCAT 1297 >seq2026 Length=4965 Score = 102 bits (112), Expect = 2e-19 Identities = 99/126 (79%), Gaps = 1/126 (1%) Strand=Plus/Plus Query 72 GATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCC 131 |||||| ||| || |||| |||||| |||| || ||||||||||| |||||| ||||||| Sbjct 499 GATTGGATAAGTTTCGCGACTGCTGTCTTCTTTCGATGTGGTAGC-GTTTCTAAGGCTCC 557 Query 132 CTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGGCCACTATCC 191 |||| | || |||| |||| |||| |||||| |||| ||||| |||| | | | | Sbjct 558 CTCTTCCGAGTCGAGCCCTTATTCTCCGTTAGCCGTAATAACCATAGTAGACTAATGCAC 617 Query 192 TACCAT 197 |||||| Sbjct 618 TACCAT 623 >seq958 Length=24593 Score = 96.9 bits (106), Expect = 1e-17 Identities = 108/142 (76%), Gaps = 3/142 (2%) Strand=Plus/Plus Query 72 GATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGG-CTC 130 |||||| || || || |||||||||| |||||| | |||||||||||| || ||| Sbjct 17747 GATTGGATAGGTTTTACGTCTGCTGCCTTTTTTGGATATAGTAGCCGTTTCTAAGAACTC 17806 Query 131 CCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGGCCACTATC 190 |||||||||| || |||||| || | |||||| |||| | |||||||||| | | | Sbjct 17807 CCTCTCCGGAGTCTAACCCTTATCCTCCGTTAGCCGTAGTAACCATGGTAGACTAATGGA 17866 Query 191 CTACCATCGAAAGTTGATAGGG 212 ||||||| | ||| |||||| Sbjct 17867 CTACCAT--GAGGTTAATAGGG 17886 >seq5978 Length=1101 Score = 93.3 bits (102), Expect = 1e-16 Identities = 98/125 (78%), Gaps = 3/125 (2%) Strand=Plus/Minus Query 43 TATTTATTGTCACTACCTCCCCGTGTCGG-GATTGGGTAATTTGCGCGCCTGCTGCCTTC 101 ||||| | ||||||| ||| || | || |||||| ||| || |||| |||||| || Sbjct 157 TATTTCTAGTCACTATCTCACC-TCCCGAAGATTGGATAAGTTTCGCGACTGCTGTATTT 99 Query 102 CTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTT 161 || |||||||||| ||||||| ||| || ||||||| | ||||||||| |||| ||||| Sbjct 98 TTTCGATGTGGTAG-CGTTTCTAAGGGTCTCTCTCCGAAGTCGAACCCTTATTCTCCGTT 40 Query 162 ACCCG 166 | ||| Sbjct 39 AGCCG 35 >seq1513 Length=23628 Score = 93.3 bits (102), Expect = 1e-16 Identities = 72/86 (84%), Gaps = 0/86 (0%) Strand=Plus/Minus Query 43 TATTTATTGTCACTACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCC 102 ||||| | ||||||| ||| | || |||||| ||| || ||||||||||||||||| Sbjct 23148 TATTTTTAGTCACTATCTCATCTCTTCAAGATTGGATAAGTTTCGCGCCTGCTGCCTTCC 23089 Query 103 TTGGATGTGGTAGCCGTTTCTCAGGC 128 ||||||||||||||||||||| |||| Sbjct 23088 TTGGATGTGGTAGCCGTTTCTAAGGC 23063 >seq7088 Length=1002 Score = 89.7 bits (98), Expect = 2e-15 Identities = 126/171 (74%), Gaps = 7/171 (4%) Strand=Plus/Plus Query 43 TATTTATTGTCACTACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCC 102 ||||| | ||||||| || || || ||||| | ||| | || ||||||| ||| Sbjct 465 TATTTCTAGTCACTATCTTACCTCCTCAGGATTAGATAAGCTTAGC--CTGCTGCATTCT 522 Query 103 TTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTA 162 || ||||||| | | |||||| | |||||||||||||| ||||||||| |||| |||||| Sbjct 523 TTCGATGTGGCAAC-GTTTCTAAAGCTCCCTCTCCGGAGTCGAACCCTTATTCTCCGTTA 581 Query 163 CCCGTTGATA-CCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGG 212 ||| | ||| | || |||| | | | ||||||| | ||| |||||| Sbjct 582 GCCG-TAATATCTATAGTAGACTAATGAACTACCAT--GAGGTTAATAGGG 629 >seq4977 Length=1214 Score = 77.0 bits (84), Expect = 1e-11 Identities = 93/125 (74%), Gaps = 4/125 (3%) Strand=Plus/Minus Query 43 TATTTATTGTCACTACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCC 102 ||| | | ||||||| ||| || || ||||| ||| | ||| |||||| |||| Sbjct 1006 TATATCTAGTCACTATCTCACCTCCTCAAGATTGAATAAGCTTTGCGACTGCTGTCTTCT 947 Query 103 TTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTA 162 || |||||||||| ||||||| ||||| ||| |||| |||||| || ||| |||||| Sbjct 946 TTCGATGTGGTAG-CGTTTCTAAGGCTTCCTTTCCG---TCGAACACTTATTTTCCGTTA 891 Query 163 CCCGT 167 |||| Sbjct 890 GCCGT 886 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510291900672