Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyocaulus_20viviparus_20[genbank_20GCA_5F000816705.1_202015-03- 12] 7,157 sequences; 160,963,781 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq919 84.2 2e-11 >seq919 Length=24097 Score = 84.2 bits (92), Expect = 2e-11 Identities = 282/439 (64%), Gaps = 0/439 (0%) Strand=Plus/Minus Query 66426 ACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGC 66485 |||| || ||||||||||||||||| || | || || || || | || | |||| Sbjct 20704 ACTCGAAAATGTCGGCATGCCATGGCTCTAAATAAATTGCAAATGCTCCTGGTCTTTTGT 20645 Query 66486 CGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCC 66545 |||||||| || || || ||||| ||||||| | ||||||| ||| || || | | Sbjct 20644 TTCCACCTTGATCAACATATCGAGCAGTATTGTTGTATACACGCAGCATTGGAACCAAAC 20585 Query 66546 CGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACAT 66605 | || || | ||||| || ||| | || || || |||| || | || |||| Sbjct 20584 CATTGGAAGTACCATTAGTACCGCCAATCAACGAACCAGTAGCCCTAATCTTATGCACAT 20525 Query 66606 TCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACAATCGGCCACTGTCCGGAATA 66665 ||| || || |||||||| | || ||||| |||||| | | || ||| Sbjct 20524 TCAAGCCGATTCCACCGGCACTTTTTGAGATCAAAGCACACTGCTTTAGCGTATCATATA 20465 Query 66666 TGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGG 66725 | || ||||||| || | | || |||| | | |||| ||| |||||| || Sbjct 20464 TCCCCGCAATGGAATCTTCACTCATAGTCAACAAGAAGCACGAAGAAAGTTGTGGCCAAT 20405 Query 66726 GTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAAT 66785 ||| | || ||| || || |||| || || || || || | | ||| || Sbjct 20404 TTGTTCCTGCATTGAACAGCGTTGGTGACGCATGAGTGAAATATCGTTCACTCATCAGAT 20345 Query 66786 TGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTGCACATCGCATCA 66845 |||| || || || | || || || | ||| ||||| || || | |||| ||||| | Sbjct 20344 TGTAGGTTTCAATTGCCGCGTCGATATCTTCACCATGGATGCCTATTGCAACACGCATGA 20285 Query 66846 GGAGGTATTGAGGCCGTTC 66864 | | | || |||||||| Sbjct 20284 GCATATGCTGTGGCCGTTC 20266 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397533321758480