Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diploscapter_20coronatus_20[genbank_20GCA_5F002207785.1_202017-06- 12] 520 sequences; 170,492,099 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq379 167 4e-39 seq51 167 4e-39 seq378 163 4e-38 seq142 163 4e-38 >seq379 Length=8845 Score = 167 bits (184), Expect = 4e-39 Identities = 176/226 (78%), Gaps = 7/226 (3%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||| |||||||| |||||||| | ||||||||||||| | Sbjct 5583 GTACAAAGGGCAGGGACGTAATCAGCGCGAGCT-GATGACTCACACTTACTAGGAATT-C 5526 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120 |||||| ||| || |||| |||| ||||||| ||||| | |||||| | || Sbjct 5525 CTCGTTCAAGGGAAATAATTACAATTCCCTATCCCAGTCACGGAAGAGTTTCAACGGTTT 5466 Query 121 CCCGG-ACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 || |||| ||||| | || || | |||||| | ||||||||| ||||||| Sbjct 5465 GCCAACACCTTTCGGCGATGGAGAG---CACGTTGAGTCTTCCAGTGTAGCACGCGTGCA 5409 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACT 225 |||| | |||||||||||||||||||||||||||| | ||||| || Sbjct 5408 GCCCCGGACATCTAAGGGCATCACAGACCTGTTATCG-CTCAATCT 5364 >seq51 Length=2732 Score = 167 bits (184), Expect = 4e-39 Identities = 176/226 (78%), Gaps = 7/226 (3%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||| |||||||| |||||||| | ||||||||||||| | Sbjct 1030 GTACAAAGGGCAGGGACGTAATCAGCGCGAGCT-GATGACTCACACTTACTAGGAATT-C 1087 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120 |||||| ||| || |||| |||| ||||||| ||||| | |||||| | || Sbjct 1088 CTCGTTCAAGGGAAATAATTACAATTCCCTATCCCAGTCACGGAAGAGTTTCAACGGTTT 1147 Query 121 CCCGG-ACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 || |||| ||||| | || || | |||||| | ||||||||| ||||||| Sbjct 1148 GCCAACACCTTTCGGCGATGGAGAG---CACGTTGAGTCTTCCAGTGTAGCACGCGTGCA 1204 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACT 225 |||| | |||||||||||||||||||||||||||| | ||||| || Sbjct 1205 GCCCCGGACATCTAAGGGCATCACAGACCTGTTATCG-CTCAATCT 1249 >seq378 Length=45461 Score = 163 bits (180), Expect = 4e-38 Identities = 175/226 (77%), Gaps = 8/226 (4%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||| |||||| ||||||||| | ||||||||||||| | Sbjct 684 GTACAAAGGGCAGGGACGTAATCAGCGCGAG--TGATGACTCACACTTACTAGGAATT-C 740 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120 |||||| ||| || |||| |||| ||||||| ||||| | |||||| | || Sbjct 741 CTCGTTCAAGGGAAATAATTACAATTCCCTATCCCAGTCACGGAAGAGTTTCAACGGTTT 800 Query 121 CCCGG-ACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 || |||| ||||| | || || | |||||| | ||||||||| ||||||| Sbjct 801 GCCAACACCTTTCGGCGATGGAGAG---CACGTTGAGTCTTCCAGTGTAGCACGCGTGCA 857 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACT 225 |||| | |||||||||||||||||||||||||||| | ||||| || Sbjct 858 GCCCCGGACATCTAAGGGCATCACAGACCTGTTATCG-CTCAATCT 902 >seq142 Length=7395 Score = 163 bits (180), Expect = 4e-38 Identities = 174/225 (77%), Gaps = 6/225 (3%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||| |||||||| |||||||| | ||||||||||||| | Sbjct 5695 GTACAAAGGGCAGGGACGTAATCAGCGCGAGCT-GATGACTCACACTTACTAGGAATT-C 5752 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120 |||||| ||| || |||| |||| ||||||| ||||| | |||||| | || Sbjct 5753 CTCGTTCAAGGGAAATAATTACAATTCCCTATCCCAGTCACGGAAGAGTTTCAACGGTTT 5812 Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180 || || ||||| | || || | |||||| | ||||||||| ||||||| | Sbjct 5813 GCCAACACTTTCGGCGATGGAGAG---CACGTTGAGTCTTCCAGTGTAGCACGCGTGCAG 5869 Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACT 225 ||| | |||||||||||||||||||||||||||| | ||||| || Sbjct 5870 CCCCGGACATCTAAGGGCATCACAGACCTGTTATCG-CTCAATCT 5913 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751996211800