Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diploscapter_20coronatus_20[genbank_20GCA_5F002207785.1_202017-06- 12] 520 sequences; 170,492,099 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq379 127 4e-27 seq378 127 4e-27 seq351 127 4e-27 seq142 127 4e-27 seq51 127 4e-27 seq144 91.5 3e-16 >seq379 Length=8845 Score = 127 bits (140), Expect = 4e-27 Identities = 180/247 (73%), Gaps = 6/247 (2%) Strand=Plus/Plus Query 74 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCATGGA 133 ||||| || || |||||| | || ||||| | || | |||| ||||| || ||||| Sbjct 4694 TTTACCTTAAATAAATTAAAATGCTCAAAATAAGCGTATGCTTGAATATCATATTATGGA 4753 Query 134 ATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAA 193 ||||| |||||||| | ||||||| ||||||||||| | | | || ||||||||||| Sbjct 4754 ATAATGAAATAGGACTT-CGGTTCT-TTTTGTTGGTTATT-GAATCGGAGTAATGATTAA 4810 Query 194 TAGGGATAGTC--GGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATT 251 |||||||| || ||||| | ||||| | |||||||||||||| ||| Sbjct 4811 TAGGGATAATCTCGGGGGCATTCGTATTTCTGCGGGAGAGGTGAAATTCTATGATCGCAG 4870 Query 252 GAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAG 311 | ||| ||| |||||||| || ||||| |||| ||| ||||||| ||||||||| Sbjct 4871 AAGGACGCCCTAAAGCGAAAGCATTTGCCAAGAATGTCTTCGTTAATCA-AGAACGAAAG 4929 Query 312 TTAGGGG 318 | || || Sbjct 4930 TCAGAGG 4936 >seq378 Length=45461 Score = 127 bits (140), Expect = 4e-27 Identities = 181/247 (73%), Gaps = 7/247 (3%) Strand=Plus/Minus Query 74 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCATGGA 133 ||||| || || |||||| | || ||||| | || | |||| ||||| || ||||| Sbjct 1571 TTTACCTTAAATAAATTAAAATGCTCAAAATAAGCGTATGCTTGAATATCATATTATGGA 1512 Query 134 ATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAA 193 ||||| |||||||| | ||||||| ||||||||||| | | | || ||||||||||| Sbjct 1511 ATAATGAAATAGGACTT-CGGTTCT-TTTTGTTGGTTATT-GAATCGGAGTAATGATTAA 1455 Query 194 TAGGGATA--GTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATT 251 |||||||| ||||||| | ||||| | |||||||||||||| || | Sbjct 1454 TAGGGATAATCTCGGGGGCATTCGTATTTCTGCGGGAGAGGTGAAATTCTATGA-TCGCA 1396 Query 252 GAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAG 311 |||| | ||| |||||||| || ||||| |||| ||| ||||||| ||||||||| Sbjct 1395 GAAGGCGCCCTAAAGCGAAAGCATTTGCCAAGAATGTCTTCGTTAATCA-AGAACGAAAG 1337 Query 312 TTAGGGG 318 | || || Sbjct 1336 TCAGAGG 1330 >seq351 Length=833670 Score = 127 bits (140), Expect = 4e-27 Identities = 180/247 (73%), Gaps = 6/247 (2%) Strand=Plus/Plus Query 74 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCATGGA 133 ||||| || || |||||| | || ||||| | || | |||| ||||| || ||||| Sbjct 833154 TTTACCTTAAATAAATTAAAATGCTCAAAATAAGCGTATGCTTGAATATCATATTATGGA 833213 Query 134 ATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAA 193 ||||| |||||||| | ||||||| ||||||||||| | | | || ||||||||||| Sbjct 833214 ATAATGAAATAGGACTT-CGGTTCT-TTTTGTTGGTTATT-GAATCGGAGTAATGATTAA 833270 Query 194 TAGGGATAGTC--GGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATT 251 |||||||| || ||||| | ||||| | |||||||||||||| ||| Sbjct 833271 TAGGGATAATCTCGGGGGCATTCGTATTTCTGCGGGAGAGGTGAAATTCTATGATCGCAG 833330 Query 252 GAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAG 311 | ||| ||| |||||||| || ||||| |||| ||| ||||||| ||||||||| Sbjct 833331 AAGGACGCCCTAAAGCGAAAGCATTTGCCAAGAATGTCTTCGTTAATCA-AGAACGAAAG 833389 Query 312 TTAGGGG 318 | || || Sbjct 833390 TCAGAGG 833396 >seq142 Length=7395 Score = 127 bits (140), Expect = 4e-27 Identities = 180/247 (73%), Gaps = 6/247 (2%) Strand=Plus/Minus Query 74 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCATGGA 133 ||||| || || |||||| | || ||||| | || | |||| ||||| || ||||| Sbjct 6583 TTTACCTTAAATAAATTAAAATGCTCAAAATAAGCGTATGCTTGAATATCATATTATGGA 6524 Query 134 ATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAA 193 ||||| |||||||| | ||||||| ||||||||||| | | | || ||||||||||| Sbjct 6523 ATAATGAAATAGGACTT-CGGTTCT-TTTTGTTGGTTATT-GAATCGGAGTAATGATTAA 6467 Query 194 TAGGGATAGTC--GGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATT 251 |||||||| || ||||| | ||||| | |||||||||||||| ||| Sbjct 6466 TAGGGATAATCTCGGGGGCATTCGTATTTCTGCGGGAGAGGTGAAATTCTATGATCGCAG 6407 Query 252 GAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAG 311 | ||| ||| |||||||| || ||||| |||| ||| ||||||| ||||||||| Sbjct 6406 AAGGACGCCCTAAAGCGAAAGCATTTGCCAAGAATGTCTTCGTTAATCA-AGAACGAAAG 6348 Query 312 TTAGGGG 318 | || || Sbjct 6347 TCAGAGG 6341 >seq51 Length=2732 Score = 127 bits (140), Expect = 4e-27 Identities = 180/247 (73%), Gaps = 6/247 (2%) Strand=Plus/Minus Query 74 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCATGGA 133 ||||| || || |||||| | || ||||| | || | |||| ||||| || ||||| Sbjct 1919 TTTACCTTAAATAAATTAAAATGCTCAAAATAAGCGTATGCTTGAATATCATATTATGGA 1860 Query 134 ATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAA 193 ||||| |||||||| | ||||||| ||||||||||| | | | || ||||||||||| Sbjct 1859 ATAATGAAATAGGACTT-CGGTTCT-TTTTGTTGGTTATT-GAATCGGAGTAATGATTAA 1803 Query 194 TAGGGATAGTC--GGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATT 251 |||||||| || ||||| | ||||| | |||||||||||||| ||| Sbjct 1802 TAGGGATAATCTCGGGGGCATTCGTATTTCTGCGGGAGAGGTGAAATTCTATGATCGCAG 1743 Query 252 GAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAG 311 | ||| ||| |||||||| || ||||| |||| ||| ||||||| ||||||||| Sbjct 1742 AAGGACGCCCTAAAGCGAAAGCATTTGCCAAGAATGTCTTCGTTAATCA-AGAACGAAAG 1684 Query 312 TTAGGGG 318 | || || Sbjct 1683 TCAGAGG 1677 >seq144 Length=2026 Score = 91.5 bits (100), Expect = 3e-16 Identities = 126/170 (74%), Gaps = 6/170 (4%) Strand=Plus/Plus Query 74 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCATGGA 133 ||||| || || |||||| | || ||||| | || | |||| ||||| || ||| | Sbjct 1853 TTTACCTTAAATAAATTAAAATGCTCAAAATAAGCGTATGCTTGAATATCATATTATG-A 1911 Query 134 ATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAA 193 ||||| |||||||| | ||||||| ||||||||||| | | | || ||||||||||| Sbjct 1912 ATAATGAAATAGGACTT-CGGTTCT-TTTTGTTGGTTATT-GAATCGGAGTAATGATTAA 1968 Query 194 TAGGGATA--GTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCT 241 |||||||| ||||||| | ||||| | |||||||||||||| Sbjct 1969 TAGGGATAATCTCGGGGGCATTCGTATTTCTGCGGGAGAGGTGAAATTCT 2018 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915195240960