Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diploscapter_20coronatus_20[genbank_20GCA_5F002207785.1_202017-06- 12] 520 sequences; 170,492,099 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq379 205 2e-50 seq51 205 2e-50 seq378 197 3e-48 seq142 197 3e-48 >seq379 Length=8845 Score = 205 bits (226), Expect = 2e-50 Identities = 240/317 (76%), Gaps = 13/317 (4%) Strand=Plus/Plus Query 20 GAGCGAGACCTTAACCTGCTAAATAG--CCAGGCC---CGCTTTGGCGGGTCGCCG--GC 72 ||||||||| || |||||||||||| | ||| | ||| |||| || || Sbjct 5271 GAGCGAGACTCTAGCCTGCTAAATAGAACGAGGATAAACCTTTTCATAGGTCCTCGATGC 5330 Query 73 TTCTTAGAGGGACTATCGGCTCA-AGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGA 131 |||||||||| | || ||| | ||||| || | ||||| | ||||||||||||||| Sbjct 5331 TTCTTAGAGGAATTAGCGGTGCTTAGCCGCACGA-GATTGAG-CGATAACAGGTCTGTGA 5388 Query 132 TGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCAC 191 ||||||||||||| | |||| ||||||| ||||||||| ||| ||||| | || || Sbjct 5389 TGCCCTTAGATGTCCGGGGCTGCACGCGTGCTACACTGGAAGACTCAACGTGCTCTCCAT 5448 Query 192 CTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGC 251 | |||| ||||| | || || | | ||||||| |||| ||||||| | |||| Sbjct 5449 C---GCCGAAAGGTGTTGGCAAACCGTTGAAACTCTTCCGTGACTGGGATAGGGAATTGT 5505 Query 252 AATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTA 311 ||||||| | ||| |||||||||| ||||||||| | | ||||||||| |||| |||||| Sbjct 5506 AATTATTTCCCTTGAACGAGGAATTCCTAGTAAGTGTGAGTCATCAGCTCGCGCTGATTA 5565 Query 312 CGTCCCTGCCCTTTGTA 328 ||||||||||||||||| Sbjct 5566 CGTCCCTGCCCTTTGTA 5582 >seq51 Length=2732 Score = 205 bits (226), Expect = 2e-50 Identities = 240/317 (76%), Gaps = 13/317 (4%) Strand=Plus/Minus Query 20 GAGCGAGACCTTAACCTGCTAAATAG--CCAGGCC---CGCTTTGGCGGGTCGCCG--GC 72 ||||||||| || |||||||||||| | ||| | ||| |||| || || Sbjct 1342 GAGCGAGACTCTAGCCTGCTAAATAGAACGAGGATAAACCTTTTCATAGGTCCTCGATGC 1283 Query 73 TTCTTAGAGGGACTATCGGCTCA-AGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGA 131 |||||||||| | || ||| | ||||| || | ||||| | ||||||||||||||| Sbjct 1282 TTCTTAGAGGAATTAGCGGTGCTTAGCCGCACGA-GATTGAG-CGATAACAGGTCTGTGA 1225 Query 132 TGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCAC 191 ||||||||||||| | |||| ||||||| ||||||||| ||| ||||| | || || Sbjct 1224 TGCCCTTAGATGTCCGGGGCTGCACGCGTGCTACACTGGAAGACTCAACGTGCTCTCCAT 1165 Query 192 CTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGC 251 | |||| ||||| | || || | | ||||||| |||| ||||||| | |||| Sbjct 1164 C---GCCGAAAGGTGTTGGCAAACCGTTGAAACTCTTCCGTGACTGGGATAGGGAATTGT 1108 Query 252 AATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTA 311 ||||||| | ||| |||||||||| ||||||||| | | ||||||||| |||| |||||| Sbjct 1107 AATTATTTCCCTTGAACGAGGAATTCCTAGTAAGTGTGAGTCATCAGCTCGCGCTGATTA 1048 Query 312 CGTCCCTGCCCTTTGTA 328 ||||||||||||||||| Sbjct 1047 CGTCCCTGCCCTTTGTA 1031 >seq378 Length=45461 Score = 197 bits (218), Expect = 3e-48 Identities = 239/317 (75%), Gaps = 14/317 (4%) Strand=Plus/Minus Query 20 GAGCGAGACCTTAACCTGCTAAATAG--CCAGGCC---CGCTTTGGCGGGTCGCCG--GC 72 ||||||||| || |||||||||||| | ||| | ||| |||| || || Sbjct 995 GAGCGAGACTCTAGCCTGCTAAATAGAACGAGGATAAACCTTTTCATAGGTCCTCGATGC 936 Query 73 TTCTTAGAGGGACTATCGGCTCA-AGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGA 131 |||||||||| | || ||| | ||||| || | ||||| | ||||||||||||||| Sbjct 935 TTCTTAGAGGAATTAGCGGTGCTTAGCCGCACGA-GATTGAG-CGATAACAGGTCTGTGA 878 Query 132 TGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCAC 191 ||||||||||||| | |||| ||||||| ||||||||| ||| ||||| | || | Sbjct 877 TGCCCTTAGATGTCCGGGGCTGCACGCGTGCTACACTGGAAGACTCAACG---TGCTCTC 821 Query 192 CTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGC 251 | | |||| ||||| | || || | | ||||||| |||| ||||||| | |||| Sbjct 820 CATCGCCGAAAGGTGTTGGCAAACCGTTGAAACTCTTCCGTGACTGGGATAGGGAATTGT 761 Query 252 AATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTA 311 ||||||| | ||| |||||||||| ||||||||| | | ||||||| | |||| |||||| Sbjct 760 AATTATTTCCCTTGAACGAGGAATTCCTAGTAAGTGTGAGTCATCA-CTCGCGCTGATTA 702 Query 312 CGTCCCTGCCCTTTGTA 328 ||||||||||||||||| Sbjct 701 CGTCCCTGCCCTTTGTA 685 >seq142 Length=7395 Score = 197 bits (218), Expect = 3e-48 Identities = 239/317 (75%), Gaps = 14/317 (4%) Strand=Plus/Minus Query 20 GAGCGAGACCTTAACCTGCTAAATAG--CCAGGCC---CGCTTTGGCGGGTCGCCG--GC 72 ||||||||| || |||||||||||| | ||| | ||| |||| || || Sbjct 6006 GAGCGAGACTCTAGCCTGCTAAATAGAACGAGGATAAACCTTTTCATAGGTCCTCGATGC 5947 Query 73 TTCTTAGAGGGACTATCGGCTCA-AGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGA 131 |||||||||| | || ||| | ||||| || | ||||| | ||||||||||||||| Sbjct 5946 TTCTTAGAGGAATTAGCGGTGCTTAGCCGCACGA-GATTGAG-CGATAACAGGTCTGTGA 5889 Query 132 TGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCAC 191 ||||||||||||| | |||| ||||||| ||||||||| ||| ||||| | || || Sbjct 5888 TGCCCTTAGATGTCCGGGGCTGCACGCGTGCTACACTGGAAGACTCAACGTGCTCTCCAT 5829 Query 192 CTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGC 251 | |||| ||| ||| || | | | ||||||| |||| ||||||| | |||| Sbjct 5828 C---GCCGAAAGTGTTGGCAAACCGT-TGAAACTCTTCCGTGACTGGGATAGGGAATTGT 5773 Query 252 AATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTA 311 ||||||| | ||| |||||||||| ||||||||| | | ||||||||| |||| |||||| Sbjct 5772 AATTATTTCCCTTGAACGAGGAATTCCTAGTAAGTGTGAGTCATCAGCTCGCGCTGATTA 5713 Query 312 CGTCCCTGCCCTTTGTA 328 ||||||||||||||||| Sbjct 5712 CGTCCCTGCCCTTTGTA 5696 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947195074560