Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dirofilaria_20immitis_20[genbank_20GCA_5F001077395.1_202013-08-23] 25,560 sequences; 84,888,114 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq5862 114 2e-23 seq4727 107 4e-21 seq774 96.9 7e-18 seq2688 86.0 1e-14 seq9660 80.6 5e-13 seq2235 78.8 2e-12 seq24699 77.0 6e-12 seq14288 77.0 6e-12 seq7665 77.0 6e-12 seq4763 77.0 6e-12 seq8607 75.2 2e-11 seq1709 75.2 2e-11 >seq5862 Length=3568 Score = 114 bits (126), Expect = 2e-23 Identities = 87/103 (84%), Gaps = 0/103 (0%) Strand=Plus/Minus Query 226 CTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAG 285 ||| |||| | ||||| | | |||||||||||| | ||| |||||||||| ||||||||| Sbjct 2881 CTGCCGTGATCGGGATCGGGAATTGCAATTATTTCCCTTGAACGAGGAATTCCTAGTAAG 2822 Query 286 CGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 || |||||||| | |||||||||||||||||||||||||| Sbjct 2821 CGTAAGTCATCAGTTCACGTTGATTACGTCCCTGCCCTTTGTA 2779 >seq4727 Length=5403 Score = 107 bits (118), Expect = 4e-21 Identities = 103/132 (78%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 197 CCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTA 256 ||| ||||| | ||||| | | ||| || |||| | | ||| | |||||||||| Sbjct 184 CCGAAAGGTATTGGTAACCGCTTGAAAATCCTCCGTGATCGAGATCGGAAATTGCAATTA 125 Query 257 TTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCC 316 || | ||| |||||||||| ||||||||| | | |||||||| | |||||||||||||| Sbjct 124 TTTCCCTTGAACGAGGAATTCCTAGTAAGTGTGAGTCATCAGATCACGTTGATTACGTCC 65 Query 317 CTGCCCTTTGTA 328 |||||||||||| Sbjct 64 CTGCCCTTTGTA 53 >seq774 Length=101805 Score = 96.9 bits (106), Expect = 7e-18 Identities = 76/91 (84%), Gaps = 0/91 (0%) Strand=Plus/Plus Query 238 GGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCA 297 |||| | | |||||||||||| | ||| |||||||||| ||||||||| | | ||||||| Sbjct 79879 GGATCGGGAATTGCAATTATTTCCCTTGAACGAGGAATTCCTAGTAAGTGTGAGTCATCA 79938 Query 298 GCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 | | ||||||||||||||||| ||||||| Sbjct 79939 GTTCATGTTGATTACGTCCCTGCTCTTTGTA 79969 >seq2688 Length=6149 Score = 86.0 bits (94), Expect = 1e-14 Identities = 68/82 (83%), Gaps = 0/82 (0%) Strand=Plus/Minus Query 247 ATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTT 306 |||||||||||| | ||| |||||||||| | ||||||| | |||||||| | |||| Sbjct 2671 ATTGCAATTATTTCCCTTGAACGAGGAATTCTTAGTAAGTATGAGTCATCAGTTCACGTT 2612 Query 307 GATTACGTCCCTGCCCTTTGTA 328 ||||||| ||||||||||||| Sbjct 2611 CATTACGTTCCTGCCCTTTGTA 2590 >seq9660 Length=4088 Score = 80.6 bits (88), Expect = 5e-13 Identities = 91/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 197 CCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTA 256 ||| ||||| | ||||| || | ||| || |||| | ||||| | | |||||||||| Sbjct 673 CCGAAAGGTTTTGGTAACCTCTTGAAAATCCTCCGTGATCGGGATCGGGAATTGCAATTA 614 Query 257 TTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCC 316 || | ||| |||||||||| || | |||| | | || |||| | | ||||| |||||| | Sbjct 613 TTTCCCTTGAACGAGGAATTCCCAATAAGTGTGAGTGATCAACTCACGTTGTTTACGTTC 554 Query 317 CT 318 || Sbjct 553 CT 552 >seq2235 Length=13418 Score = 78.8 bits (86), Expect = 2e-12 Identities = 76/94 (81%), Gaps = 3/94 (3%) Strand=Plus/Plus Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 ||||||||||||| | || | ||| | |||||| ||| ||||||||| |||||| Sbjct 12740 CTTCTTAGAGGGATAAGCGATGTTTAGCTGCAAGAAGTT-GAG-CAATAACAGATCTGTG 12797 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTA 164 |||||||||||||||| |||| ||||||| |||| Sbjct 12798 ATGCCCTTAGATGTTCAGGGCTGCACGCGTGCTA 12831 >seq24699 Length=228 Score = 77.0 bits (84), Expect = 6e-12 Identities = 75/95 (79%), Gaps = 4/95 (4%) Strand=Plus/Minus Query 238 GGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAG-CGCGTGTC--- 293 |||| || |||||||||||| ||| |||||||||| ||||||||| | | || Sbjct 95 GGATCAAGAATTGCAATTATTTACCTTAAACGAGGAATTCCTAGTAAGTTGTGAATCATT 36 Query 294 ATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 || ||| | |||||||||| ||||||||||||||| Sbjct 35 ATTAGCTCACGTTGATTACATCCCTGCCCTTTGTA 1 >seq14288 Length=1091 Score = 77.0 bits (84), Expect = 6e-12 Identities = 71/90 (79%), Gaps = 0/90 (0%) Strand=Plus/Minus Query 237 GGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATC 296 || || ||| |||||||||||| | ||| ||||| ||| ||| |||| | | | |||| Sbjct 384 GGAATCGAGAATTGCAATTATTTCCCTTGAACGAAAAATTTCTAATAAGTGTGAGCCATC 325 Query 297 AGCACGCGTTGATTACGTCCCTGCCCTTTG 326 || | |||||||||| ||||||||||||| Sbjct 324 AGTTCACGTTGATTACATCCCTGCCCTTTG 295 >seq7665 Length=13105 Score = 77.0 bits (84), Expect = 6e-12 Identities = 75/93 (81%), Gaps = 3/93 (3%) Strand=Plus/Plus Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| | | | | |||||| |||||| ||| |||||||||||||||| Sbjct 6534 CTTCTTAGAGGGACAAGCAGTGTTTAGCCGAATGAAGTT-GAG-CAATAACAGGTCTGTG 6591 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCT 163 | || ||||||||| | || | |||||||||| Sbjct 6592 ACGCGCTTAGATGTCCAGGACTACACGCGCGCT 6624 >seq4763 Length=6204 Score = 77.0 bits (84), Expect = 6e-12 Identities = 66/82 (80%), Gaps = 0/82 (0%) Strand=Plus/Minus Query 247 ATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTT 306 |||||||||||| ||| |||||||||| | |||||| | ||||| ||| | |||| Sbjct 827 ATTGCAATTATTTTCCTTGAACGAGGAATTCTTAGTAAATATGAGTCATTAGCTCACGTT 768 Query 307 GATTACGTCCCTGCCCTTTGTA 328 | |||||||||||| ||||||| Sbjct 767 GTTTACGTCCCTGCTCTTTGTA 746 >seq8607 Length=8035 Score = 75.2 bits (82), Expect = 2e-11 Identities = 79/99 (80%), Gaps = 4/99 (4%) Strand=Plus/Plus Query 73 TTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGA 131 |||||||||| || | || | ||||| |||||| ||| |||||||| |||||||| Sbjct 2736 TTCTTAGAGGTACAAGCGATGTTTAGCCGCATGAAGTT-GAG-CAATAACAAGTCTGTGA 2793 Query 132 TGCCCTT-AGATGTTCTGGGCCGCACGCGCGCTACACTG 169 ||||||| |||||| | ||| |||||||||||| |||| Sbjct 2794 TGCCCTTAAGATGTCCAGGGTTGCACGCGCGCTATACTG 2832 >seq1709 Length=65758 Score = 75.2 bits (82), Expect = 2e-11 Identities = 46/49 (94%), Gaps = 0/49 (0%) Strand=Plus/Minus Query 121 CAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTG 169 |||||||||||||||||||||||| | |||| ||||||||||||||||| Sbjct 65758 CAGGTCTGTGATGCCCTTAGATGTCCAGGGCTGCACGCGCGCTACACTG 65710 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 946957895680