Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dirofilaria_20immitis_20[genbank_20GCA_5F001077395.1_202013-08-23] 25,560 sequences; 84,888,114 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq978 149 2e-33 seq15908 140 1e-30 seq1136 129 2e-27 seq951 125 2e-26 seq5658 96.9 1e-17 seq7487 89.7 2e-15 seq10166 80.6 8e-13 seq5648 77.0 1e-11 seq1677 77.0 1e-11 >seq978 Length=11978 Score = 149 bits (164), Expect = 2e-33 Identities = 144/183 (79%), Gaps = 4/183 (2%) Strand=Plus/Plus Query 44 ATTTATTGTCACTACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCT 103 |||| | |||||||||||| | | | | || |||||| |||||||||||||||||||| | Sbjct 8446 ATTTTTCGTCACTACCTCCTCATTTTGAGAATGGGTA-TTTGCGCGCCTGCTGCCTTCTT 8504 Query 104 ---TGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGT 160 || || || ||| ||||| |||| ||| ||||||||| ||||| ||| |||| |||| Sbjct 8505 CCGTGAATCTGTTAGTCGTTTTTCAGACTCTCTCTCCGGAGTCGAATCCTTATTCTCCGT 8564 Query 161 TACCCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATT 220 ||| |||| || |||||||| || |||||||||||||||| || |||||| | | Sbjct 8565 TACTCGTTACAACTATGGTAGGTACATAAACTACCATCGAAAGTTGGTAAGGCAGACACT 8624 Query 221 TGA 223 ||| Sbjct 8625 TGA 8627 >seq15908 Length=888 Score = 140 bits (154), Expect = 1e-30 Identities = 224/316 (71%), Gaps = 17/316 (5%) Strand=Plus/Plus Query 175 ATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCG 234 ||||||||| || |||||||||||| |||||| |||||| | |||| || | || Sbjct 582 ATGGTAGGCACATAAACTACCATCGAAAATTGATAAGGCAGACACTTGATAGATACGCCG 641 Query 235 CCGGCTCAAGGCCATGCGATTCGTTA-AGTTATTATGAATCACC----AAGGAGCCCCGA 289 |||| |||| ||||||||| | | |||||| || ||||| || | ||| Sbjct 642 CCGGTACAAGACCATGCGATCAGCCATGGTTATTCAGAGTCACCAATTAACGGGCCAAAT 701 Query 290 AGGGCGTTGGTTTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTA-GCATG 348 | || | | |||| || ||||| || | | | ||| ||||||| | ||| | ||||| Sbjct 702 AACTCGATTGGTTTTAATTTAATAGATGCGCTCGTTCAAAAGTCGGAGATTTGATGCATG 761 Query 349 TATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAA 408 ||||||||||||||| |||| ||||| || || | | || || | | ||| Sbjct 762 CATTAGCTCTAGAATTGCCACAGTTATTCACGTTG---GATAATA------ACATTATAG 812 Query 409 CTGATTTAATGAGCCATTCGCAGTTTCACTG-TATAG-ATTGCTTATACTTAGACATGCA 466 ||| | |||||| || |||| ||||||||| ||||| || || ||||||||||||| Sbjct 813 CTGTTATAATGAACCGTTCGTGGTTTCACTGTTATAGCTTTATTTGAACTTAGACATGCA 872 Query 467 TGGCTTAATCTTTGAG 482 ||||||| ||||||| Sbjct 873 TGGCTTAGCCTTTGAG 888 >seq1136 Length=195591 Score = 129 bits (142), Expect = 2e-27 Identities = 172/238 (72%), Gaps = 7/238 (3%) Strand=Plus/Minus Query 43 TATTTATTGTCACTACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCC 102 ||||| |||||||| ||| | | || |||||||| | |||| ||||| |||||| Sbjct 101654 TATTTTTTGTCACTCTTTCCTCATTCTAAGAGTGGGTAATCTTCGCGACTGCTTCCTTCC 101595 Query 103 TTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTA 162 ||| |||||| | | |||||||||||||||||| ||||| ||| |||| |||||| Sbjct 101594 TTGAATGTGGCAAC------TCAGGCTCCCTCTCCGGAGTCGAAACCTTATTCTCCGTTA 101541 Query 163 CCCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTG 222 | |||| || || ||||| || ||| |||||||| |||| | |||||| ||||| Sbjct 101540 CTCGTTACAACTATAATAGGCACATAAACTATCATCGAAATTTGACAAGGCAGACATTTG 101481 Query 223 AATGAACCATCGCCGGCTCAAGGCCATGCGATTCGTTA-AGTTATTATGAATCACCAA 279 | || | ||| ||| ||| | || ||||||| | || |||| || |||| || Sbjct 101480 ATAGATACGTCGTCGGTACAACACTATACGATTCGCCATAGCTATTCAGAGTCACTAA 101423 >seq951 Length=98984 Score = 125 bits (138), Expect = 2e-26 Identities = 115/143 (80%), Gaps = 2/143 (1%) Strand=Plus/Plus Query 41 AGTATTTATTGTCACTACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTT 100 || |||| | |||||||||| | | | | || | | | |||||||||||||||||||| Sbjct 38900 AGCATTT-TCGTCACTACCTTCTCATTCTGAGAGTAGATGATTTGCGCGCCTGCTGCCTT 38958 Query 101 CCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGT 160 |||||| ||||||||| |||||||| |||| | |||||| |||||| || |||| || | Sbjct 38959 CCTTGGCTGTGGTAGCTGTTTCTCA-GCTCTTTTTCCGGAGTCGAACGCTTATTCGCCAT 39017 Query 161 TACCCGTTGATACCATGGTAGGC 183 |||||||| |||||||||||| Sbjct 39018 TACCCGTTACAACCATGGTAGGC 39040 >seq5658 Length=109 Score = 96.9 bits (106), Expect = 1e-17 Identities = 86/108 (80%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 147 CCCTAATTCCCCGTTACCCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAGTTG 206 |||| |||| |||||||||||| |||||||||||| || |||||||||||||||| Sbjct 1 CCCTTATTCTCCGTTACCCGTTACAACCATGGTAGGCACATAAACTACCATCGAAAGTTG 60 Query 207 ATAGGGCAGAAATTTGAATGAACCATCGCCGGCTCAAGGCCATGCGAT 254 ||| |||||| | |||| || ||||||| |||| ||||||||| Sbjct 61 ATAAGGCAGACACTTGATAGATATGTCGCCGGTACAAGACCATGCGAT 108 >seq7487 Length=1790 Score = 89.7 bits (98), Expect = 2e-15 Identities = 70/84 (83%), Gaps = 0/84 (0%) Strand=Plus/Minus Query 131 CCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGGCCACTATC 190 ||||| |||| ||||||||| |||| ||||||||||| |||||||||||| || Sbjct 298 CCTCTACGGAGTCGAACCCTTATTCTACGTTACCCGTTACAACCATGGTAGGCACATAAA 239 Query 191 CTACCATCGAAAGTTGATAGGGCA 214 ||||||||||||||||||| |||| Sbjct 238 CTACCATCGAAAGTTGATAAGGCA 215 >seq10166 Length=2536 Score = 80.6 bits (88), Expect = 8e-13 Identities = 82/105 (78%), Gaps = 2/105 (2%) Strand=Plus/Plus Query 393 ATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGT-ATAGATTGCTT 451 ||||| || | ||| ||| | ||||||||| ||||| ||||||| | |||| || || Sbjct 1642 ATCAAGTACATTATAGCTGTTATAATGAGCCGTTCGCGGTTTCACCATTATAGGTTTATT 1701 Query 452 ATA-CTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGAC 495 | ||||||||||||||||||| ||||||| |||||||| || Sbjct 1702 TGAACTTAGACATGCATGGCTTAGCCTTTGAGNNAAGCATATAAC 1746 >seq5648 Length=17527 Score = 77.0 bits (84), Expect = 1e-11 Identities = 109/150 (73%), Gaps = 4/150 (3%) Strand=Plus/Plus Query 76 GGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCT 135 |||||||||| |||||| |||||||||||||| |||||||| ||||||| ||| | | Sbjct 9714 GGGTAATTTGAACGCCTGTTGCCTTCCTTGGATATGGTAGCCTTTTCTCAAGCTTGC-AT 9772 Query 136 CCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGGCCACT--ATCCTA 193 || ||| || | | |||| || ||| ||||| | | || || || | | | | Sbjct 9773 CCCAAATTAAATCTTGATTCTCCATTATCCGTT-AAAATGTGATAAGCAAATAAAAAAAA 9831 Query 194 CCATCGAAAGTTGATAGGGCAGAAATTTGA 223 |||| ||||||||||| |||| | |||| Sbjct 9832 CCATTGAAAGTTGATAAAGCAGGTACTTGA 9861 >seq1677 Length=101204 Score = 77.0 bits (84), Expect = 1e-11 Identities = 72/91 (79%), Gaps = 2/91 (2%) Strand=Plus/Plus Query 405 ATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATG 464 ||| ||| | ||||||||| || || |||||| | |||| || || ||||||| ||| Sbjct 92169 ATAGCTGTTATAATGAGCCGTTAGCGGTTTCATT--ATAGTTTATTTGAACTTAGATATG 92226 Query 465 CATGGCTTAATCTTTGAGACAAGCATATGAC 495 ||||||||| |||||||||||||||| || Sbjct 92227 CATGGCTTAGCTTTTGAGACAAGCATATAAC 92257 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510013941760